RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 AAMDCQ9H7C9 122 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 SIGLEC9Q9Y336 463 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 ODF1Q14990 250 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-205ENST00000409455 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
LIMS2-205ENST00000409455 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 CNTFRP26992 372 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 CEND1Q8N111 149 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 TTTY13Q9BZ97 58 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 HHLA3Q9XRX5 114 aa12.11□□□□□ -0.47
LIMS2-205ENST00000409455 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 I3L2K1 104 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 NDUFB3O43676 98 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 FCN3O75636 299 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 IGKCP01834 107 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 PRSS1P07477 247 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 TM2D2Q9BX73 214 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 LEPP41159 167 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 CCL17Q92583 94 aa12.1□□□□□ -0.47
LIMS2-205ENST00000409455 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 E9PLD3 99 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 CRYGBP07316 175 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 GNLYP22749 145 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 WFDC2Q14508 124 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 LINC01559Q495D7 138 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 RNF125Q96EQ8 232 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
LIMS2-205ENST00000409455 IL4P05112 153 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 EVI2AP22794 236 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 FCER1GP30273 86 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 PDE6HQ13956 83 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 B9A039 149 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
LIMS2-205ENST00000409455 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
LIMS2-205ENST00000409455 IGLL5B9A064 214 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 DPM2O94777 84 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 SRSF1Q07955 248 aaKnown RBP eCLIP12.07□□□□□ -0.48
LIMS2-205ENST00000409455 ZC2HC1BQ5TFG8 222 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 S100A7AQ86SG5 101 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 GTSCR1Q86UQ5 136 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 SVIPQ8NHG7 77 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
LIMS2-205ENST00000409455 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
LIMS2-205ENST00000409455 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
LIMS2-205ENST00000409455 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 FOXC2Q99958 501 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 LRBAP50851 2863 aa12.07□□□□□ -0.48
LIMS2-205ENST00000409455 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 H3BMG7 143 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 ATP5LO75964 103 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-205ENST00000409455 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 ARPC1AQ92747 370 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 EGR2P11161 476 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-205ENST00000409455 ETDBQ3ZM63 59 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
LIMS2-205ENST00000409455 DLX6P56179 175 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 FBXL15Q9H469 300 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 IGSF10Q6WRI0 2623 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 TAL2Q16559 108 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 PRR25Q96S07 402 aa12.05□□□□□ -0.48
LIMS2-205ENST00000409455 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-205ENST00000409455 IGKV2-40A0A087WW87 121 aaPredicted RBP12.04□□□□□ -0.48
LIMS2-205ENST00000409455 K7EIM0 57 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 K7EMI3 77 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 IGKV2D-40P01614 121 aaPredicted RBP12.04□□□□□ -0.48
LIMS2-205ENST00000409455 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 ITLN2Q8WWU7 325 aaPredicted RBP12.04□□□□□ -0.48
LIMS2-205ENST00000409455 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 TNFRSF6BO95407 300 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 ZNF502Q8TBZ5 544 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
LIMS2-205ENST00000409455 IGHV1-3A0A0C4DH29 117 aa12.03□□□□□ -0.48
LIMS2-205ENST00000409455 CNIH1O95406 144 aa12.03□□□□□ -0.48
LIMS2-205ENST00000409455 RAB9AP51151 201 aa12.03□□□□□ -0.48
LIMS2-205ENST00000409455 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
LIMS2-205ENST00000409455 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
LIMS2-205ENST00000409455 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms