RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 ORM1P02763 201 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 EBLN2Q6P2I7 272 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 IL17RELQ6ZVW7 336 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 GLMPQ8WWB7 406 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 TMEM213A2RRL7 107 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 CYB5R2Q6BCY4 276 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 CLEC5AQ9NY25 188 aa13.72□□□□□ -0.21
CHTOP-205ENST00000403433 COL12A1Q99715 3063 aa13.71□□□□□ -0.21
CHTOP-205ENST00000403433 SSTP61278 116 aa13.71□□□□□ -0.21
CHTOP-205ENST00000403433 SPATA45Q537H7 98 aa13.71□□□□□ -0.21
CHTOP-205ENST00000403433 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.21
CHTOP-205ENST00000403433 ZNF705AQ6ZN79 300 aaPredicted RBP13.71□□□□□ -0.21
CHTOP-205ENST00000403433 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
CHTOP-205ENST00000403433 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 IGHV3-11P01762 117 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 CSN3P07498 182 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 BBC3Q96PG8 261 aaPredicted RBP13.7□□□□□ -0.22
CHTOP-205ENST00000403433 C2orf88Q9BSF0 95 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
CHTOP-205ENST00000403433 IGLC6P0CF74 106 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 ZNF138P52744 262 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 Q6ZS46 218 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 TMEM70Q9BUB7 260 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
CHTOP-205ENST00000403433 SVEP1Q4LDE5 3571 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 A0A0G2JLM5 398 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 OR5AL1P0C617 328 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 TWIST1Q15672 202 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 LINC01559Q495D7 138 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 MUC21Q5SSG8 566 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 FAM104BQ5XKR9 115 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
CHTOP-205ENST00000403433 J3QLI3 93 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 EREGO14944 169 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 AMN1Q8IY45 258 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 ZNF843Q8N446 348 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 A1L4Q6 167 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 D6R8Y8 96 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 M0R143 59 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
CHTOP-205ENST00000403433 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 HIST1H1AQ02539 215 aaPredicted RBP13.68□□□□□ -0.22
CHTOP-205ENST00000403433 C9orf47Q6ZRZ4 202 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 FA2HQ7L5A8 372 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 ATOH7Q8N100 152 aa13.68□□□□□ -0.22
CHTOP-205ENST00000403433 A0A096LNT2 108 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 ORMDL3Q8N138 153 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 PRSS3P2Q8NHM4 247 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 NPFFR1Q9GZQ6 430 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 U3KQK5 164 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 FLNCQ14315 2725 aa13.67□□□□□ -0.22
CHTOP-205ENST00000403433 CFHR3Q02985 330 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 DEFB112Q30KQ8 113 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 SNHG12Q9BXW3 62 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 ZNF580Q9UK33 172 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-13■■■■□ 21.6
CHTOP-205ENST00000403433 A0A1B0GV90 55 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 IGHV4-59P01825 116 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 LCNL1Q6ZST4 164 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 MRPL52Q86TS9 123 aaKnown RBP13.66□□□□□ -0.22
CHTOP-205ENST00000403433 KLHDC1Q8N7A1 406 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 PRELID3AQ96N28 172 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 HSPB8Q9UJY1 196 aa13.66□□□□□ -0.22
CHTOP-205ENST00000403433 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
CHTOP-205ENST00000403433 C20orf202A1L168 122 aa13.65□□□□□ -0.22
CHTOP-205ENST00000403433 TGFAP01135 160 aa13.65□□□□□ -0.22
CHTOP-205ENST00000403433 MRPL51Q4U2R6 128 aaKnown RBP13.65□□□□□ -0.22
CHTOP-205ENST00000403433 CNFNQ9BYD5 112 aa13.65□□□□□ -0.22
CHTOP-205ENST00000403433 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 CRXO43186 299 aaPredicted RBP13.64□□□□□ -0.23
CHTOP-205ENST00000403433 LINC00173Q6ZV60 143 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 ZNF575Q86XF7 245 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 PPP1R14DQ9NXH3 145 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 SRSF1Q07955 248 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHTOP-205ENST00000403433 MAP1LC3CQ9BXW4 147 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 TMEM191AQ9H0A3 160 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 UQCR10Q9UDW1 63 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 USP24Q9UPU5 2620 aa13.64□□□□□ -0.23
CHTOP-205ENST00000403433 RPL11P62913 178 aaKnown RBP13.63□□□□□ -0.23
CHTOP-205ENST00000403433 TMEM95Q3KNT9 176 aa13.63□□□□□ -0.23
CHTOP-205ENST00000403433 SPATA12Q7Z6I5 190 aa13.63□□□□□ -0.23
CHTOP-205ENST00000403433 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
CHTOP-205ENST00000403433 MAPK1IP1LQ8NDC0 245 aa13.63□□□□□ -0.23
CHTOP-205ENST00000403433 PSMG3-AS1Q96PY0 264 aa13.63□□□□□ -0.23
CHTOP-205ENST00000403433 IGKV3D-20A0A0C4DH25 116 aa13.62□□□□□ -0.23
CHTOP-205ENST00000403433 CKS2P33552 79 aa13.62□□□□□ -0.23
CHTOP-205ENST00000403433 OR10AG1Q8NH19 301 aa13.62□□□□□ -0.23
CHTOP-205ENST00000403433 TIMM8BQ9Y5J9 83 aaPredicted RBP13.62□□□□□ -0.23
CHTOP-205ENST00000403433 LENEPQ9Y5L5 61 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms