RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 MORN2Q502X0 79 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 WFDC1Q9HC57 220 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 LY75O60449 1722 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 FAM236AA0A1B0GUQ0 79 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 FAM236BA0A1B0GV22 79 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 SPRY2O43597 315 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 IFI6P09912 130 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 CEND1Q8N111 149 aa8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 DAZ1Q9NQZ3 744 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-217ENST00000399641 TRAV3A0A0B4J244 114 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 ZFP36P26651 326 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 SLAQ13239 276 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 AGMATQ9BSE5 352 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 IGLV3-12A0A075B6K2 115 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 RTTNQ86VV8 2226 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 IGKV1D-13A0A0B4J2D9 117 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 TAX1BP3O14907 124 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 IGKV1-13P0DP09 117 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 A0A087WWC5 75 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 BUB1B-PAK6H3BSN5 160 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 V9GYY9 64 aa8.94□□□□□ -0.98
CACNA1C-217ENST00000399641 C5orf64Q2M2E5 130 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 DAND5Q8N907 189 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 C18orf12Q96KH6 178 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 IGHV2-70DA0A0C4DH43 119 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 DEFB125Q8N687 156 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 LYPD6BQ8NI32 183 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 PIFOQ8TCI5 191 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 ZDBF2Q9HCK1 2354 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 CCL24O00175 119 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 IGHV2-70P01814 119 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 HGFACQ04756 655 aa8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 RPP25LQ8N5L8 163 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-217ENST00000399641 KIAA1217Q5T5P2 1943 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 TRPM7Q96QT4 1865 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 IGKV1-6A0A0C4DH72 117 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 SMIM27A0A1W2PRY6 76 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 J3KT08 172 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 DEFB4AO15263 64 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 GP9P14770 177 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 TMEM61Q8N0U2 210 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 CTHRC1Q96CG8 243 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 ZNF492Q9P255 531 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 HEPN1Q6WQI6 88 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 AHCTF1Q8WYP5 2266 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 LYPD3O95274 346 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 LYPD2Q6UXB3 125 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
CACNA1C-217ENST00000399641 LINC00205P59089 165 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 LAIR2Q6ISS4 152 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 FGFBP3Q8TAT2 258 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 SPTA1P02549 2419 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 EP300Q09472 2414 aaPredicted RBP8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 Q9H8V8 135 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 COL4A5P29400 1685 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 TRBV5-7A0A0A0MS05 114 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 C2orf66Q6UXQ4 117 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 SERP1Q9Y6X1 66 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 IGF2-ASQ6U949 168 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 ARFGEF1Q9Y6D6 1849 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 PRO1854Q9UHT4 67 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
CACNA1C-217ENST00000399641 LOXL1Q08397 574 aaPredicted RBP8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 CABIN1Q9Y6J0 2220 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 A6NED7 52 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 LTAP01374 205 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 MLANAQ16655 118 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 C1orf100Q5SVJ3 147 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 C5orf24Q7Z6I8 188 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 SNRNP200O75643 2136 aaKnown RBP8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 FOXI1Q12951 378 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 C9orf139Q6ZV77 190 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 DOCK5Q9H7D0 1870 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 WBP1Q96G27 269 aa8.9□□□□□ -0.98
CACNA1C-217ENST00000399641 IGKV1D-43A0A0B4J1Z2 117 aa8.9□□□□□ -0.99
CACNA1C-217ENST00000399641 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.99
CACNA1C-217ENST00000399641 GLRX5Q86SX6 157 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 PIN1P1O15428 100 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 NRGNQ92686 78 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 COL11A2P13942 1736 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 NPSP0C0P6 89 aa8.89□□□□□ -0.99
CACNA1C-217ENST00000399641 IGKV1-9A0A0C4DH69 117 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms