RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 A0A1B0GV90 55 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 ANK1P16157 1881 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 GFI1Q99684 422 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 ARHGEF17Q96PE2 2063 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 C10orf105Q8TEF2 133 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 CHAC1Q9BUX1 264 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 INAFM2P0DMQ5 153 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 ADORA2A-AS1P86434 159 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 ZNF581Q9P0T4 197 aa9.59□□□□□ -0.87
CACNA1C-213ENST00000399629 A0A1B0GW64 132 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 MYCNOSP40205 109 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 YLPM1P49750 1951 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 H3BRN7 92 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 GYPEP15421 78 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 UBE2AP49459 152 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 SEC16AO15027 2179 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 ZSWIM8A7E2V4 1837 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 TIMM17AQ99595 171 aa9.58□□□□□ -0.88
CACNA1C-213ENST00000399629 WIPF2Q8TF74 440 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 PROK2Q9HC23 129 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 ETDCA0A1B0GVM5 59 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 TPSG1Q9NRR2 321 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 ESPL1Q14674 2120 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
CACNA1C-213ENST00000399629 TRBV19A0A075B6N1 114 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 SOCS3O14543 225 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 HERVK_113P63121 156 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 LHFPL1Q86WI0 220 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 TMEM213A2RRL7 107 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 H0YIZ8 118 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 Q6ZS49 121 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 Q6ZWC4 215 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 CENPVL3A0A0U1RRI6 287 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 DAZAP2Q15038 168 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 PRORYQ9H606 182 aa9.56□□□□□ -0.88
CACNA1C-213ENST00000399629 TRAV26-2A0A0B4J265 109 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 RNF144BQ7Z419 303 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 PYGO2Q9BRQ0 406 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 MAP1BP46821 2468 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 BCL6BQ8N143 479 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 DIAPH2-AS1Q14236 149 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 RNF138Q8WVD3 245 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 GUSBP1Q15486 140 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 LY6G6FQ5SQ64 297 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
CACNA1C-213ENST00000399629 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
CACNA1C-213ENST00000399629 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
CACNA1C-213ENST00000399629 MEGF9Q9H1U4 602 aa9.54□□□□□ -0.88
CACNA1C-213ENST00000399629 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-213ENST00000399629 WDR86Q86TI4 376 aa9.54□□□□□ -0.88
CACNA1C-213ENST00000399629 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 GBF1Q92538 1859 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 ZNF318Q5VUA4 2279 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 C2orf66Q6UXQ4 117 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 ZNF503-AS2A6NEH8 195 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 RNASE13Q5GAN3 156 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 Q8N8P6 123 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 LINC01551Q86U37 167 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 MYO7BQ6PIF6 2116 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
CACNA1C-213ENST00000399629 IGHV4OR15-8A0A075B7B6 117 aa9.52□□□□□ -0.88
CACNA1C-213ENST00000399629 A0A087WW49 117 aa9.52□□□□□ -0.88
CACNA1C-213ENST00000399629 ANAPC13Q9BS18 74 aa9.52□□□□□ -0.88
CACNA1C-213ENST00000399629 RP1P56715 2156 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 A0A0G2JRQ6 117 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 K7EQD1 137 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 BTCP35070 178 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 PLXNA3P51805 1871 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 TANC1Q9C0D5 1861 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 INAFM1C9JVW0 142 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 IGHV4-4A0A075B6R2 117 aa9.52□□□□□ -0.89
CACNA1C-213ENST00000399629 F6UB75 175 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms