RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RNF183Q96D59 192 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 RBAKDNA6NC62 111 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PAGE4O60829 102 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TCRAP04437 139 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 RBMY1A1P0DJD3 496 aaKnown RBP9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 RBMY1CP0DJD4 496 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 GOLT1AQ6ZVE7 132 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 LYPD6BQ8NI32 183 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 Q8TAT8 98 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 RXFP4Q8TDU9 374 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ARL2-SNX15V9GYD0 113 aa9.02□□□□□ -0.97
HLA-DQB1-203ENST00000399082 STAB2Q8WWQ8 2551 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TRAV12-2A0A075B6T6 113 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 IGLV2-11P01706 119 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CSN1S1P47710 185 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PRR9Q5T870 116 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 C1orf158Q8N1D5 194 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CMTM2Q8TAZ6 248 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 RCHY1Q96PM5 261 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZNF492Q9P255 531 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 EPDR1Q9UM22 224 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TP53TG1Q9Y2A0 90 aa9.01□□□□□ -0.97
HLA-DQB1-203ENST00000399082 SPRY2O43597 315 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 HBE1P02100 147 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CRISP2P16562 243 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PCNPQ8WW12 178 aaKnown RBP9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TVP23CQ96ET8 276 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 SGK494Q96LW2 274 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 IGF2BP2-AS1Q96M15 143 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 LINC00477Q96M19 166 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 LINC00479Q96M42 142 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 GNG13Q9P2W3 67 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 X6R8D5 127 aa9□□□□□ -0.97
HLA-DQB1-203ENST00000399082 KLLNB2CW77 178 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PEX7O00628 323 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CDKN1BP46527 198 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZNF138P52744 262 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 BLOC1S1P78537 153 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 IFITM2Q01629 132 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PMS2P11Q13670 270 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TMEM78Q5T7P6 136 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 Q6ZQT7 251 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ATG101Q9BSB4 218 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 C1QTNF4Q9BXJ3 329 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 ZMAT4Q9H898 229 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
HLA-DQB1-203ENST00000399082 AMBPP02760 352 aa8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 LEPP41159 167 aa8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CST9LP1Q5W188 147 aa8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 NKX6-2Q9C056 277 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 MANBALQ9NQG1 85 aa8.98□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TRAV34A0A0B4J273 112 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TRBV7-9A0A0J9YWB2 115 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 SERTM2A0A1B0GWG4 89 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 C11orf94C9JXX5 98 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 J3KRW8 73 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 INSP01308 110 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 IFNA7P01567 189 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PRM2P04554 102 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 NMBP08949 121 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 BCL2P10415 239 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PPT1P50897 306 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 BTN1A1Q13410 526 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 Q8NAQ8 132 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 OR11H2Q8NH07 326 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 C2CD4CQ8TF44 421 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 PSG8Q9UQ74 426 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 U3KQK5 164 aa8.97□□□□□ -0.97
HLA-DQB1-203ENST00000399082 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TEX46H3BTG2 121 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TSPOP30536 169 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 HIST1H2BAQ96A08 127 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C11orf52Q96A22 123 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 RARRES2Q99969 163 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 TCEAL7Q9BRU2 100 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 EDA2RQ9HAV5 297 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 KLF12Q9Y4X4 402 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 LENEPQ9Y5L5 61 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.98
HLA-DQB1-203ENST00000399082 C7orf71A4D174 169 aa8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 F6UZH7 168 aa8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 ZNF324O75467 553 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQB1-203ENST00000399082 Q86TA4 180 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms