RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PRO1854Q9UHT4 67 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 DKK1O94907 266 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 PLA2G2CQ5R387 149 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 SPAG17Q6Q759 2223 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 COL4A6Q14031 1691 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 IGLC1P0CG04 106 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 IL15RAQ13261 267 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 ZC2HC1AQ96GY0 325 aa6.65□□□□□ -1.34
SPTLC3-201ENST00000399002 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.35
SPTLC3-201ENST00000399002 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.35
SPTLC3-201ENST00000399002 NUP214P35658 2090 aaPredicted RBP6.65□□□□□ -1.35
SPTLC3-201ENST00000399002 C9JQL5 133 aa6.65□□□□□ -1.35
SPTLC3-201ENST00000399002 RUSC1-AS1Q66K80 236 aa6.65□□□□□ -1.35
SPTLC3-201ENST00000399002 IFITM1P13164 125 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 TICRRQ7Z2Z1 1910 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 Q5PR19 223 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 Q6ZVH6 145 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 CYYR1Q96J86 154 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 UBE2E2Q96LR5 201 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 PTPRDP23468 1912 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 MLANAQ16655 118 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 SP5Q6BEB4 398 aaPredicted RBP6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 SH2D6Q7Z4S9 175 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 DSCR8Q96T75 97 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 MYLKQ15746 1914 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 NINQ8N4C6 2090 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 TRBV6-1A0A0K0K1D8 114 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 GAGE12JA6NER3 117 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 GAGE4Q13068 117 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 GAGE5Q13069 117 aa6.64□□□□□ -1.35
SPTLC3-201ENST00000399002 ARID1BQ8NFD5 2236 aaPredicted RBP6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 GTSF1LQ9H1H1 148 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 C5orf24Q7Z6I8 188 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 RNF138Q8WVD3 245 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 KIAA1671Q9BY89 1806 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 TRACP01848 142 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 LINC00205P59089 165 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 SPINK13Q1W4C9 94 aa6.63□□□□□ -1.35
SPTLC3-201ENST00000399002 J3QQQ9 107 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 NDUFS7O75251 213 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 FGF6P10767 208 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 CKAP5Q14008 2032 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 NPYP01303 97 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 TCTEX1D4Q5JR98 221 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 KLK9Q9UKQ9 250 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 TMEM89A2RUT3 159 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 K7EP13 123 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 LHBP01229 141 aa6.62□□□□□ -1.35
SPTLC3-201ENST00000399002 PRSS57Q6UWY2 283 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 ZNF491Q8N8L2 437 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 K7EN84 100 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 IGLL1P15814 213 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 IGFL2Q6UWQ7 119 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 ZNRF2Q8NHG8 242 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 DEFB130BP0DP73 79 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 DEFB130AP0DP74 79 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 C16orf74Q96GX8 76 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 TRAV12-1A0A0B4J245 112 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 CRLF1O75462 422 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 C11orf44Q8N8P7 122 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 SLC25A29Q8N8R3 303 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-201ENST00000399002 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 F5H768 121 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 SLX1AQ9BQ83 275 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 MYOFQ9NZM1 2061 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 HELZP42694 1942 aaKnown RBP6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 Q96MF0 132 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 XCL2Q9UBD3 114 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 VPREB3Q9UKI3 123 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 RSPO1Q2MKA7 263 aaPredicted RBP6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 C12orf74Q32Q52 190 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 IGF2BP2-AS1Q96M15 143 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
SPTLC3-201ENST00000399002 SCRT2Q9NQ03 307 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 SCN2AQ99250 2005 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 ANKRD29Q8N6D5 301 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms