RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 C20orf202A1L168 122 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 SYS1-DBNDD2H3BUS1 97 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 LY6EQ16553 131 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 FAM104BQ5XKR9 115 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 SPATA12Q7Z6I5 190 aa10.65□□□□□ -0.7
PRAME-202ENST00000398743 D6R8Y8 96 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 H3BUX3 64 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 ORM1P02763 201 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 IGLC6P0CF74 106 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 ARL3P36405 182 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 AMN1Q8IY45 258 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 PRSS3P2Q8NHM4 247 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 MRPL53Q96EL3 112 aaKnown RBP10.65□□□□□ -0.71
PRAME-202ENST00000398743 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.71
PRAME-202ENST00000398743 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 PIEZO1Q92508 2521 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 TRAV8-2A0A0B4J237 113 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 MUC21A0A0G2JKD1 596 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 MUC21A0A140T8X8 626 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 TWIST1Q15672 202 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 IL17RELQ6ZVW7 336 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 MAP1LC3CQ9BXW4 147 aa10.64□□□□□ -0.71
PRAME-202ENST00000398743 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 IGHG2P01859 326 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 Q6ZN92 141 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 U3KQK5 164 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 A6NDX4 124 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 H3BUA1 57 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 ZNF575Q86XF7 245 aa10.63□□□□□ -0.71
PRAME-202ENST00000398743 BRI3O95415 125 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 PPIFP30405 207 aaKnown RBP10.62□□□□□ -0.71
PRAME-202ENST00000398743 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
PRAME-202ENST00000398743 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 SPOCK3Q9BQ16 436 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 CELSR1Q9NYQ6 3014 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
PRAME-202ENST00000398743 IGLL1P15814 213 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
PRAME-202ENST00000398743 PET117Q6UWS5 81 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 OR10AG1Q8NH19 301 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 CNFNQ9BYD5 112 aa10.62□□□□□ -0.71
PRAME-202ENST00000398743 B4DSR2 109 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 NDUFA4O00483 81 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
PRAME-202ENST00000398743 BATFQ16520 125 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
PRAME-202ENST00000398743 TIMM8BQ9Y5J9 83 aaPredicted RBP10.61□□□□□ -0.71
PRAME-202ENST00000398743 TCAPO15273 167 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
PRAME-202ENST00000398743 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 CKS2P33552 79 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 DSCR9P59020 149 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 C9orf47Q6ZRZ4 202 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 PSMG3-AS1Q96PY0 264 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 IGSF10Q6WRI0 2623 aa10.6□□□□□ -0.71
PRAME-202ENST00000398743 BLCAPP62952 87 aa10.59□□□□□ -0.71
PRAME-202ENST00000398743 H0Y8G0 127 aa10.59□□□□□ -0.71
PRAME-202ENST00000398743 GATA3P23771 443 aa10.59□□□□□ -0.71
PRAME-202ENST00000398743 TSPOP30536 169 aa10.59□□□□□ -0.71
PRAME-202ENST00000398743 PPP1R14DQ9NXH3 145 aa10.59□□□□□ -0.71
PRAME-202ENST00000398743 DOPEY1Q5JWR5 2465 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 IGKV3D-20A0A0C4DH25 116 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 SMAD7O15105 426 aaKnown RBP10.58□□□□□ -0.72
PRAME-202ENST00000398743 IGHV3-11P01762 117 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 PF4V1P10720 104 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 ZNF747Q9BV97 191 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 ST20Q9HBF5 79 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 LAMTOR2Q9Y2Q5 125 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 CACNA1BQ00975 2339 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 AVPP01185 164 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 FAM106AQ4KMX7 169 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 NRGNQ92686 78 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
PRAME-202ENST00000398743 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
PRAME-202ENST00000398743 FLNCQ14315 2725 aa10.57□□□□□ -0.72
PRAME-202ENST00000398743 SPTAN1Q13813 2472 aaKnown RBP10.57□□□□□ -0.72
PRAME-202ENST00000398743 A0A0G2JLM5 398 aa10.57□□□□□ -0.72
PRAME-202ENST00000398743 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
PRAME-202ENST00000398743 LOXL1Q08397 574 aaPredicted RBP10.57□□□□□ -0.72
PRAME-202ENST00000398743 COL5A1-AS1Q5SY13 56 aa10.57□□□□□ -0.72
PRAME-202ENST00000398743 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms