RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 FXYD6-FXYD2A0A087WZ82 144 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 CRISP2P16562 243 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 RANP62826 216 aaKnown RBP11.84□□□□□ -0.51
APTR-201ENST00000398043 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 INO80EQ8NBZ0 244 aaPredicted RBP11.84□□□□□ -0.51
APTR-201ENST00000398043 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
APTR-201ENST00000398043 NACAE9PAV3 2078 aa11.83□□□□□ -0.51
APTR-201ENST00000398043 ZNF324O75467 553 aaPredicted RBP11.83□□□□□ -0.52
APTR-201ENST00000398043 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
APTR-201ENST00000398043 NMBP08949 121 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 SERF2P84101 59 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
APTR-201ENST00000398043 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 ZFAND2AQ8N6M9 145 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 TMEM263Q8WUH6 116 aaKnown RBP11.83□□□□□ -0.52
APTR-201ENST00000398043 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
APTR-201ENST00000398043 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 C7orf71A4D174 169 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 RBAKDNA6NC62 111 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 J3KRW8 73 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 CD300CQ08708 224 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 SUN5Q8TC36 379 aa11.82□□□□□ -0.52
APTR-201ENST00000398043 MUC4Q99102 2169 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 STAG3L2P0CL84 134 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 STAG3L3P0CL85 134 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 CDC34P49427 236 aaPredicted RBP11.81□□□□□ -0.52
APTR-201ENST00000398043 DAD1P61803 113 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 PRR9Q5T870 116 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 FAM210BQ96KR6 192 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 LINC00467Q9BRT7 94 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
APTR-201ENST00000398043 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 SMLR1H3BR10 107 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
APTR-201ENST00000398043 ARL14EPLP0DKL9 152 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 HTN1P15515 57 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 BTN1A1Q13410 526 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 LINC00612Q8N6U2 182 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
APTR-201ENST00000398043 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
APTR-201ENST00000398043 ZNF138P52744 262 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 Q6ZQT7 251 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 Q8TAT8 98 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
APTR-201ENST00000398043 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
APTR-201ENST00000398043 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 PGPA6NDG6 321 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 ARPC5O15511 151 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 MBP02144 154 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 RNASE4P34096 147 aaKnown RBP11.78□□□□□ -0.52
APTR-201ENST00000398043 CSN1S1P47710 185 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 C11orf72Q8NBR9 251 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 RXFP4Q8TDU9 374 aa11.78□□□□□ -0.52
APTR-201ENST00000398043 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
APTR-201ENST00000398043 DNAH6Q9C0G6 4158 aa11.77□□□□□ -0.52
APTR-201ENST00000398043 GPX1P07203 203 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 GCHFRP30047 84 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 ZNF726P1Q15940 193 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 TMED6Q8WW62 240 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 LENEPQ9Y5L5 61 aa11.77□□□□□ -0.53
APTR-201ENST00000398043 CBY3A6NI87 242 aa11.76□□□□□ -0.53
APTR-201ENST00000398043 TAAR5O14804 337 aa11.76□□□□□ -0.53
APTR-201ENST00000398043 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
APTR-201ENST00000398043 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
APTR-201ENST00000398043 HTN3P15516 51 aa11.75□□□□□ -0.53
APTR-201ENST00000398043 ZNF345Q14585 488 aa11.75□□□□□ -0.53
APTR-201ENST00000398043 KCNRGQ8N5I3 272 aa11.75□□□□□ -0.53
APTR-201ENST00000398043 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
APTR-201ENST00000398043 ACTR3CQ9C0K3 210 aaPredicted RBP11.75□□□□□ -0.53
APTR-201ENST00000398043 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 Q6AWC8 147 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
APTR-201ENST00000398043 TVP23CQ96ET8 276 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
APTR-201ENST00000398043 CXorf1O96002 111 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 ATP5G1P05496 136 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 ATP5G3P48201 142 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 GNG5P63218 68 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
APTR-201ENST00000398043 GSN-AS1Q9NRJ2 163 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms