RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 ERG28Q9UKR5 140 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 I3L2K1 104 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 IGKV1-17P01599 117 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 SCNM1Q9BWG6 230 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 SHISA9B4DS77 424 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 LYNX1G3V0Z9 82 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 LYNX1P0DP58 116 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
CHMP1A-201ENST00000397901 POLEQ07864 2286 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 VSTM5A8MXK1 200 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 K7ENP7 123 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 NDUFS7O75251 213 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 CDIP1Q9H305 208 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 PSG8Q9UQ74 426 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 S4R3C0 116 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 U3KQK5 164 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 APOMO95445 188 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 IGLV1-47P01700 117 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CHMP1A-201ENST00000397901 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 D6R8Y8 96 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 M0R3E3 92 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 CNIH1O95406 144 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 PAX8Q06710 450 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 LCNL1Q6ZST4 164 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 RNF183Q96D59 192 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 PRELID3AQ96N28 172 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 TMSB15BA0A087X1C1 80 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 IGKV2D-26A0A0A0MRZ7 120 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 E7EQL1 145 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 CRIP1P50238 77 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 FOXI1Q12951 378 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 ATP6V0E2Q8NHE4 81 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 IGFBPL1Q8WX77 278 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 RPEQ96AT9 228 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
CHMP1A-201ENST00000397901 Q6AWC8 147 aa12.52□□□□□ -0.4
CHMP1A-201ENST00000397901 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
CHMP1A-201ENST00000397901 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.4
CHMP1A-201ENST00000397901 SS18L2Q9UHA2 77 aa12.52□□□□□ -0.4
CHMP1A-201ENST00000397901 TAL2Q16559 108 aa12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 C12orf74Q32Q52 190 aa12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 AMTNQ6UX39 209 aa12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 C8orf49Q96NF6 230 aa12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-201ENST00000397901 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 K7EIM0 57 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 IL4P05112 153 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 FXYD7P58549 80 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 WI2-2373I1.2A0A1W2PRP0 233 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 H3BRN7 92 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 GATA3P23771 443 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
CHMP1A-201ENST00000397901 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 CSMD1Q96PZ7 3565 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 TRBV6-1A0A0K0K1D8 114 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 GAGE5Q13069 117 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 GAGE6Q13070 117 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 Q6ZUT4 128 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
CHMP1A-201ENST00000397901 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
CHMP1A-201ENST00000397901 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
CHMP1A-201ENST00000397901 ZNF562Q6V9R5 426 aa12.49□□□□□ -0.41
CHMP1A-201ENST00000397901 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
CHMP1A-201ENST00000397901 EVI2AP22794 236 aa12.49□□□□□ -0.41
CHMP1A-201ENST00000397901 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 TLN1Q9Y490 2541 aaKnown RBP12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 TIMM23O14925 209 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 ODF1Q14990 250 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 ANAPC13Q9BS18 74 aa12.48□□□□□ -0.41
CHMP1A-201ENST00000397901 K7EMI3 77 aa12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 IGKCP01834 107 aa12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 ONECUT1Q9UBC0 465 aa12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 MRPS12O15235 138 aaKnown RBP12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 XGP55808 180 aa12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
CHMP1A-201ENST00000397901 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.42
CHMP1A-201ENST00000397901 MSRB2Q9Y3D2 182 aa12.46□□□□□ -0.42
CHMP1A-201ENST00000397901 SH2D1AO60880 128 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms