RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
PTPRD-205ENST00000397611 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 EML6Q6ZMW3 1958 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 IFITM1P13164 125 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 ATXN8Q156A1 80 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 TRBV20-1A0A075B6N2 111 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 NPIPB5A8MRT5 1133 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 DNAL4O96015 105 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 FAM168AQ92567 244 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 G3V4G9 280 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAFA1Q96PS6 74 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 USP9XQ93008 2570 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-205ENST00000397611 ID1P41134 155 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF474Q6S9Z5 364 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-205ENST00000397611 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 C2orf70A6NJV1 201 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 PPP1R17O96001 155 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRD-205ENST00000397611 IGHV1-46P01743 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 RHOGP84095 191 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE5Q13069 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE6Q13070 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 CEND1Q8N111 149 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 C8orf46Q8TAG6 207 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE12JA6NER3 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 H0YJW9 148 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE7O76087 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 IGLV1-47P01700 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE12FP0CL80 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE12GP0CL81 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE12IP0CL82 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 PLNP26678 52 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 GAGE4Q13068 117 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 Q8TAT8 98 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 ABHD17AQ96GS6 310 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 VGLL1Q99990 258 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 HEATR1Q9H583 2144 aaKnown RBP4.36□□□□□ -1.71
PTPRD-205ENST00000397611 FABP5P3A8MUU1 101 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 TNFRSF13BO14836 293 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-205ENST00000397611 IGLC1P0CG04 106 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 WT1-ASQ06250 92 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 FAM215AQ9Y5M1 114 aa4.36□□□□□ -1.71
PTPRD-205ENST00000397611 DOPEY1Q5JWR5 2465 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 CCL3L1P16619 93 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
PTPRD-205ENST00000397611 PLA2G5P39877 138 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 KLK9Q2XQG4 91 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 SLC25A39Q9BZJ4 359 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-205ENST00000397611 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 KLK9Q9UKQ9 250 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 TRAV8-3A0A0A6YYJ7 113 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 MSMPQ1L6U9 139 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF688P0C7X2 276 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 TCF15Q12870 199 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 Q8N976 141 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 FAM90A27PA6NNH2 459 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 H7C1H1 209 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 K7EM74 188 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 M0R2P5 195 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 SUMO2P61956 95 aaKnown RBP4.35□□□□□ -1.71
PTPRD-205ENST00000397611 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 FDCSPQ8NFU4 85 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 FAM57AQ8TBR7 257 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 FBXL19-AS1Q494R0 122 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 PAPPA-AS1Q5QFB9 102 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 GLMPQ8WWB7 406 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 NEU4Q8WWR8 484 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-205ENST00000397611 MYO18BQ8IUG5 2567 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 SPAARA0A1B0GVQ0 90 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 ATP5G2Q06055 141 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 PPP1R27Q86WC6 154 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 FXYD5Q96DB9 178 aa4.35□□□□□ -1.71
PTPRD-205ENST00000397611 PTPN13Q12923 2485 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 LGALS9BQ3B8N2 356 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 IGLL5B9A064 214 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 C8orf49Q96NF6 230 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 KMT2EQ8IZD2 1858 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 GP9P14770 177 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 FAM159AQ6UWV7 190 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 PATE2Q6UY27 113 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-205ENST00000397611 H3BMM0 161 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 SRSF6Q13247 344 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms