RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 K7EN84 100 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 DNAL4O96015 105 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 PSMG4Q5JS54 123 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 SIGLEC15Q6ZMC9 328 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 PCSK5Q92824 1860 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
CCDC40-204ENST00000397545 Q6ZPA2 131 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 OR5A1Q8NGJ0 315 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 NPFFR1Q9GZQ6 430 aa8.64□□□□□ -1.03
CCDC40-204ENST00000397545 NPC2P61916 151 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 Q6ZS92 163 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 Q6ZSR3 168 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 RNF182Q8N6D2 247 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 TMEM8BA6NDV4 472 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 TMEM95Q3KNT9 176 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 SIGMAR1Q99720 223 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 SLC25A2Q9BXI2 301 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
CCDC40-204ENST00000397545 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
CCDC40-204ENST00000397545 SSBP2P81877 361 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-204ENST00000397545 MSRB2Q9Y3D2 182 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 TSPAN13O95857 204 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 Q8NFD4 153 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 IGFBPL1Q8WX77 278 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
CCDC40-204ENST00000397545 FNDC10F2Z333 226 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 KRTAP27-1Q3LI81 207 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 CD5LO43866 347 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 FCN3O75636 299 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 PRB1P04280 392 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 KIAA1549Q9HCM3 1950 aa8.62□□□□□ -1.03
CCDC40-204ENST00000397545 LOC400499M0QZD8 3231 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 NDUFB8O95169 186 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PAX1P15863 534 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PRR20EP86478 221 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PRR20CP86479 221 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PRR20DP86480 221 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PRR20BP86481 221 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 PRR20AP86496 221 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 WT1P19544 449 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-204ENST00000397545 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 A0A087WWL8 130 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 FRMD6-AS1P0C7T7 363 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 SPRNQ5BIV9 151 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 C11orf53Q8IXP5 236 aa8.61□□□□□ -1.03
CCDC40-204ENST00000397545 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 H3BUX3 64 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 TNFRSF6BO95407 300 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 IGLV3-9A0A075B6K5 115 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 G3V318 75 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 CD28P10747 220 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 GNLYP22749 145 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 PRTN3P24158 256 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 LOXP28300 417 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-204ENST00000397545 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 C11orf52Q96A22 123 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 C17orf77Q96MU5 243 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 TRGV2A0A075B6R0 118 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 NUP37Q8NFH4 326 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
CCDC40-204ENST00000397545 TRBV19A0A075B6N1 114 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 A8MWV9 139 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 DAZAP2Q15038 168 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-204ENST00000397545 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 USP9XQ93008 2570 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-204ENST00000397545 MORN5Q5VZ52 161 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 FXYD5Q96DB9 178 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 RNF5Q99942 180 aa8.59□□□□□ -1.03
CCDC40-204ENST00000397545 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 OVOL1O14753 267 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 SAA4P35542 130 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 OCIAD2Q56VL3 154 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 C10orf126Q8N4M7 172 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 BPESC1Q9GZL8 116 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 PAX2Q02962 417 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 TRAV26-2A0A0B4J265 109 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 K7EM74 188 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 ZNF562Q6V9R5 426 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 ASPMQ8IZT6 3477 aa8.58□□□□□ -1.04
CCDC40-204ENST00000397545 ETDBQ3ZM63 59 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 MRPL51Q4U2R6 128 aaKnown RBP8.57□□□□□ -1.04
CCDC40-204ENST00000397545 COA6Q5JTJ3 125 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms