RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 H3BRN7 92 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 CA1P00915 261 aaPredicted RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 ATP5G3P48201 142 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 UBE2G2P60604 165 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 SLC25A39Q9BZJ4 359 aaPredicted RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 TMA7Q9Y2S6 64 aaKnown RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 PPP1R2P9O14990 202 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 NDUFB4O95168 129 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 ID1P41134 155 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 RPL23P62829 140 aaKnown RBP10.67□□□□□ -0.7
SEC13-208ENST00000397109 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
SEC13-208ENST00000397109 YTHDF2Q9Y5A9 579 aaKnown RBP10.67□□□□□ -0.7
SEC13-208ENST00000397109 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
SEC13-208ENST00000397109 GALR1P47211 349 aa10.66□□□□□ -0.7
SEC13-208ENST00000397109 MEOX2P50222 304 aa10.66□□□□□ -0.7
SEC13-208ENST00000397109 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
SEC13-208ENST00000397109 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
SEC13-208ENST00000397109 GPR82Q96P67 336 aa10.66□□□□□ -0.7
SEC13-208ENST00000397109 OR11H2Q8NH07 326 aa10.65□□□□□ -0.7
SEC13-208ENST00000397109 BTF3L4Q96K17 158 aa10.65□□□□□ -0.7
SEC13-208ENST00000397109 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.7
SEC13-208ENST00000397109 TAS2R60P59551 318 aa10.64□□□□□ -0.71
SEC13-208ENST00000397109 NUTF2P61970 127 aaKnown RBP10.64□□□□□ -0.71
SEC13-208ENST00000397109 HIST1H2BAQ96A08 127 aa10.64□□□□□ -0.71
SEC13-208ENST00000397109 FXYD5Q96DB9 178 aa10.64□□□□□ -0.71
SEC13-208ENST00000397109 YPEL4Q96NS1 127 aa10.64□□□□□ -0.71
SEC13-208ENST00000397109 IMMP2LQ96T52 175 aa10.64□□□□□ -0.71
SEC13-208ENST00000397109 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 ISLRO14498 428 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
SEC13-208ENST00000397109 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
SEC13-208ENST00000397109 ADIRFQ15847 76 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 MORN5Q5VZ52 161 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 BPIFA4PQ86YQ2 179 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
SEC13-208ENST00000397109 SCO2A0A1W2PP80 73 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 H3BMM0 161 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 SOCS3O14543 225 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 OR10J4P0C629 311 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 HIST1H1EP10412 219 aaKnown RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 RPL7P18124 248 aaKnown RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 AKR1C3P42330 323 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 ELOBQ15370 118 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 SMIM12Q96EX1 92 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 C1QTNF4Q9BXJ3 329 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
SEC13-208ENST00000397109 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
SEC13-208ENST00000397109 TRBV24-1A0A075B6N3 115 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 RAB5AP20339 215 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 S100PP25815 95 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 DYNC2H1Q8NCM8 4307 aaKnown RBP10.61□□□□□ -0.71
SEC13-208ENST00000397109 LCE6AA0A183 80 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 H7BYZ3 331 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 PDE6HQ13956 83 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
SEC13-208ENST00000397109 SAV1Q9H4B6 383 aaPredicted RBP10.61□□□□□ -0.71
SEC13-208ENST00000397109 A0A087X0K7 114 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 PYYP10082 97 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
SEC13-208ENST00000397109 RAB5BP61020 215 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 C17orf77Q96MU5 243 aa10.6□□□□□ -0.71
SEC13-208ENST00000397109 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 IGLC2P0DOY2 106 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 MIFP14174 115 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 GNG4P50150 75 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
SEC13-208ENST00000397109 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 PYGO2Q9BRQ0 406 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 OTORQ9NRC9 128 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 EPDR1Q9UM22 224 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 KLF12Q9Y4X4 402 aa10.59□□□□□ -0.71
SEC13-208ENST00000397109 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
SEC13-208ENST00000397109 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
SEC13-208ENST00000397109 KCNIP4Q6PIL6 250 aa10.58□□□□□ -0.72
SEC13-208ENST00000397109 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
SEC13-208ENST00000397109 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms