RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
SCNN1A-205ENST00000396966 C20orf144Q9BQM9 153 aa13.21□□□□□ -0.29
SCNN1A-205ENST00000396966 TEX15Q9BXT5 2789 aa13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 BUB3O43684 328 aa13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 HSBP1O75506 76 aa13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 FOXA3P55318 350 aaPredicted RBP13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 RBPMS2Q6ZRY4 209 aaKnown RBP13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 BORCS7Q96B45 105 aa13.21□□□□□ -0.3
SCNN1A-205ENST00000396966 ITPR3Q14573 2671 aa13.2□□□□□ -0.3
SCNN1A-205ENST00000396966 CLPSL1A2RUU4 121 aa13.2□□□□□ -0.3
SCNN1A-205ENST00000396966 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
SCNN1A-205ENST00000396966 PDZD2O15018 2839 aa13.2□□□□□ -0.3
SCNN1A-205ENST00000396966 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 K7EQM0 130 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 M0R143 59 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 M0R3E3 92 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 NDUFA4O00483 81 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 PSMB8P28062 276 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 ZC2HC1AQ96GY0 325 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 MIEN1Q9BRT3 115 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 NPIPB6E9PJ23 425 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 CD5LO43866 347 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
SCNN1A-205ENST00000396966 M0R2Z0 102 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 M0QZ24 198 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 RAB4AP20338 218 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 CSN1S1P47710 185 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 PSG8Q9UQ74 426 aa13.18□□□□□ -0.3
SCNN1A-205ENST00000396966 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 A0A087X0K7 114 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 PSG3Q16557 428 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 ATOH7Q8N100 152 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 OR4B1Q8NGF8 309 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 U3KQE9 123 aa13.17□□□□□ -0.3
SCNN1A-205ENST00000396966 CHEK1O14757 476 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 URB1-AS1Q96HZ7 61 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 ZFP30Q9Y2G7 519 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 IGHV3-66A0A0C4DH42 116 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 FAM231BA6NCW3 169 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 SSTP61278 116 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 SPATA45Q537H7 98 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
SCNN1A-205ENST00000396966 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-205ENST00000396966 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-205ENST00000396966 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.3
SCNN1A-205ENST00000396966 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
SCNN1A-205ENST00000396966 IGHV3OR16-13A0A075B7E8 117 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 IGHV3-74A0A0B4J1X5 117 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 ELANEP08246 267 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 CRIP1P50238 77 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 FOXE3Q13461 319 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 GCN1Q92616 2671 aaKnown RBP13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
SCNN1A-205ENST00000396966 CTRLP40313 264 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 C10orf99Q6UWK7 81 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 Q8N2B8 174 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 ZNF469Q96JG9 3925 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 HAX1O00165 279 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
SCNN1A-205ENST00000396966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
SCNN1A-205ENST00000396966 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-205ENST00000396966 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
SCNN1A-205ENST00000396966 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-205ENST00000396966 FAM106AQ4KMX7 169 aa13.12□□□□□ -0.31
SCNN1A-205ENST00000396966 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 ZNF138P52744 262 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 C2orf70A6NJV1 201 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 TCAPO15273 167 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 BATFQ16520 125 aa13.11□□□□□ -0.31
SCNN1A-205ENST00000396966 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms