RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CFHR3Q02985 330 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 USMG5Q96IX5 58 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 TAL2Q16559 108 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 PPP1R32Q7Z5V6 425 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 CFHR4Q92496 578 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL4A4-201ENST00000396625 SIGLEC12Q96PQ1 595 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 IGHV2-70P01814 119 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 SAP25Q8TEE9 199 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 IGKV1D-43A0A0B4J1Z2 117 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 PDE6HQ13956 83 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 CRYGCP07315 174 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 ID3Q02535 119 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 WDR83OSQ9Y284 106 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 ANKHD1Q8IWZ3 2542 aaKnown RBP8.42□□□□□ -1.06
COL4A4-201ENST00000396625 WDR90Q96KV7 1748 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 COX8AP10176 69 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 A0A1B0GUS0 222 aa8.42□□□□□ -1.06
COL4A4-201ENST00000396625 NXPH4O95158 308 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 RPP25LQ8N5L8 163 aaKnown RBP8.41□□□□□ -1.06
COL4A4-201ENST00000396625 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 SEC61GP60059 68 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 WBP1Q96G27 269 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 FBLN5Q9UBX5 448 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 IGHV1-3A0A0C4DH29 117 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 TIAF1O95411 115 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 REG4Q9BYZ8 158 aa8.41□□□□□ -1.06
COL4A4-201ENST00000396625 ZNF837Q96EG3 531 aaPredicted RBP8.41□□□□□ -1.06
COL4A4-201ENST00000396625 DAZ1Q9NQZ3 744 aaKnown RBP8.41□□□□□ -1.06
COL4A4-201ENST00000396625 DAD1P61803 113 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 SMIM2Q9BVW6 85 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 BVES-AS1Q5T3Y7 98 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 Q8N8P6 123 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 RNASE6Q93091 150 aaKnown RBP8.4□□□□□ -1.06
COL4A4-201ENST00000396625 Q0VG73 95 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 C10orf55Q5SWW7 151 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 LYZL4Q96KX0 146 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 IGLV3-21P80748 117 aaPredicted RBP8.4□□□□□ -1.06
COL4A4-201ENST00000396625 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
COL4A4-201ENST00000396625 FGFBP3Q8TAT2 258 aa8.4□□□□□ -1.07
COL4A4-201ENST00000396625 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.07
COL4A4-201ENST00000396625 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
COL4A4-201ENST00000396625 GPR179Q6PRD1 2367 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 A0A1B0GX51 115 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 RMI2Q96E14 147 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 H0YJW9 148 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV1-8P0DP01 117 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 RFNGQ9Y644 331 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 M0R1W7 72 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 ATOX1O00244 68 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 ACYP1P07311 99 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 C5orf64Q2M2E5 130 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 A0A087WV48 116 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 TMEM200BQ69YZ2 307 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 TMEM213A2RRL7 107 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 ITGBL1O95965 494 aaPredicted RBP8.39□□□□□ -1.07
COL4A4-201ENST00000396625 LINC01545Q5VT33 79 aa8.39□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 HERVK_113P63121 156 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 SMIM10L1P0DMW3 83 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 SMIM10Q96HG1 83 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 THSD7AQ9UPZ6 1657 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 IGKV1D-8A0A087WSZ0 117 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 LYNX1G3V0Z9 82 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 LYNX1P0DP58 116 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
COL4A4-201ENST00000396625 FAM236AA0A1B0GUQ0 79 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 FAM236BA0A1B0GV22 79 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 UBE2BP63146 152 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 C9orf106Q8NAJ2 232 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 CSRP3P50461 194 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 KLK9Q9UKQ9 250 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 ZCCHC24Q8N2G6 241 aaKnown RBP8.38□□□□□ -1.07
COL4A4-201ENST00000396625 IGKV1-9A0A0C4DH69 117 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 EIF4EBP2Q13542 120 aaPredicted RBP8.38□□□□□ -1.07
COL4A4-201ENST00000396625 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV4-4A0A075B6R2 117 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 CACNA1AO00555 2505 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 COL4A1P02462 1669 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 Q6ZWC4 215 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms