RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ICAM4Q14773 271 aa12.01□□□□□ -0.49
CXCL1-201ENST00000395761 PCNPQ8WW12 178 aaKnown RBP12.01□□□□□ -0.49
CXCL1-201ENST00000395761 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
CXCL1-201ENST00000395761 YTHDF2Q9Y5A9 579 aaKnown RBP12.01□□□□□ -0.49
CXCL1-201ENST00000395761 X6R8D5 127 aa12.01□□□□□ -0.49
CXCL1-201ENST00000395761 M0R2Z0 102 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 DEFB4AO15263 64 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 PAGE4O60829 102 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 IFNA1P01562 189 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
CXCL1-201ENST00000395761 SPINK13Q1W4C9 94 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 CCDC28AQ8IWP9 274 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 MUC7Q8TAX7 377 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 GNG13Q9P2W3 67 aa12□□□□□ -0.49
CXCL1-201ENST00000395761 UBE2G2P60604 165 aa11.99□□□□□ -0.49
CXCL1-201ENST00000395761 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
CXCL1-201ENST00000395761 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 CRXO43186 299 aaPredicted RBP11.98□□□□□ -0.49
CXCL1-201ENST00000395761 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
CXCL1-201ENST00000395761 C1orf158Q8N1D5 194 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 Q8NAQ8 132 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 TCEAL7Q9BRU2 100 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 PPP1R14DQ9NXH3 145 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
CXCL1-201ENST00000395761 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 RBFOX3A6NFN3 312 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
CXCL1-201ENST00000395761 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 BCL2P10415 239 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 ERCC8Q13216 396 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
CXCL1-201ENST00000395761 CST9LP1Q5W188 147 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
CXCL1-201ENST00000395761 C5orf17Q8NAS9 161 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 MED9Q9NWA0 146 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
CXCL1-201ENST00000395761 IGHV4-28A0A0C4DH34 117 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 LOC102723971A0A1B0GUV8 181 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 NPIPB6E9PJ23 425 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 CSN1S1P47710 185 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
CXCL1-201ENST00000395761 IGKV2-40A0A087WW87 121 aaPredicted RBP11.95□□□□□ -0.5
CXCL1-201ENST00000395761 RBAKDNA6NC62 111 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 DIRC3C9JPN6 131 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 IGKV2D-40P01614 121 aaPredicted RBP11.95□□□□□ -0.5
CXCL1-201ENST00000395761 AMBPP02760 352 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
CXCL1-201ENST00000395761 MIFP14174 115 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 ATP5G3P48201 142 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 VGLL1Q99990 258 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 AGPAT4-IT1Q9H0P7 198 aa11.95□□□□□ -0.5
CXCL1-201ENST00000395761 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
CXCL1-201ENST00000395761 SERTM2A0A1B0GWG4 89 aa11.94□□□□□ -0.5
CXCL1-201ENST00000395761 F6UZH7 168 aa11.94□□□□□ -0.5
CXCL1-201ENST00000395761 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
CXCL1-201ENST00000395761 SMDT1Q9H4I9 107 aa11.94□□□□□ -0.5
CXCL1-201ENST00000395761 GOLT1BQ9Y3E0 138 aa11.94□□□□□ -0.5
CXCL1-201ENST00000395761 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 LINC00862A6NCI5 91 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 PDE6DO43924 150 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 INSP01308 110 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 TCRAP04437 139 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 PRM2P04554 102 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 CDKN1BP46527 198 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 CASC10Q5T4H9 136 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 NEU1Q99519 415 aa11.93□□□□□ -0.5
CXCL1-201ENST00000395761 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
CXCL1-201ENST00000395761 J3KRW8 73 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 TOR2AQ5JU69 321 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 C11orf52Q96A22 123 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 TMEM208Q9BTX3 173 aa11.92□□□□□ -0.5
CXCL1-201ENST00000395761 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 SMIM9A6NGZ8 99 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 PEX7O00628 323 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 TSPOP30536 169 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 NANOS2P60321 138 aaKnown RBP11.91□□□□□ -0.5
CXCL1-201ENST00000395761 GNG5P63218 68 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 PEA15Q15121 130 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 CYB561D1Q8N8Q1 229 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 FAM19A4Q96LR4 140 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 ODF3Q96PU9 254 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 KLF12Q9Y4X4 402 aa11.91□□□□□ -0.5
CXCL1-201ENST00000395761 FBLL1A6NHQ2 334 aaKnown RBP11.9□□□□□ -0.5
CXCL1-201ENST00000395761 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
CXCL1-201ENST00000395761 TMEM250H0YL14 139 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms