RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 LGALS9BQ3B8N2 356 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 Q5PR19 223 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 ZFHX3Q15911 3703 aa11.21□□□□□ -0.61
CLIP2-203ENST00000395060 KLRD1Q13241 179 aa11.21□□□□□ -0.61
CLIP2-203ENST00000395060 WFDC12Q8WWY7 111 aa11.21□□□□□ -0.61
CLIP2-203ENST00000395060 C16orf97H3BN30 126 aa11.21□□□□□ -0.62
CLIP2-203ENST00000395060 ZC2HC1BQ5TFG8 222 aa11.21□□□□□ -0.62
CLIP2-203ENST00000395060 CHD8Q9HCK8 2581 aa11.21□□□□□ -0.62
CLIP2-203ENST00000395060 H3BRN7 92 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 WFDC2Q14508 124 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 TMEM30BQ3MIR4 351 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-203ENST00000395060 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
CLIP2-203ENST00000395060 CELSR1Q9NYQ6 3014 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 NCBP2LA6PVI3 153 aaKnown RBP11.2□□□□□ -0.62
CLIP2-203ENST00000395060 BUB1B-PAK6H3BSN5 160 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 DLX6P56179 175 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 RBPJQ06330 500 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 FOXC1Q12948 553 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 H3BMG7 143 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 Q6ZQT7 251 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 RNASE6Q93091 150 aaKnown RBP11.2□□□□□ -0.62
CLIP2-203ENST00000395060 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
CLIP2-203ENST00000395060 A0A0G2JNJ9 132 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 IGFL3Q6UXB1 125 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 Q9UFV3 132 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 NDUFA3O95167 84 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 AZU1P20160 251 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 ARPC1AQ92747 370 aa11.19□□□□□ -0.62
CLIP2-203ENST00000395060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
CLIP2-203ENST00000395060 THBDP07204 575 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
CLIP2-203ENST00000395060 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 TSSC4Q9Y5U2 329 aaPredicted RBP11.18□□□□□ -0.62
CLIP2-203ENST00000395060 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 CRYGBP07316 175 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 PRR25Q96S07 402 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
CLIP2-203ENST00000395060 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 FAM57AQ8TBR7 257 aa11.18□□□□□ -0.62
CLIP2-203ENST00000395060 TRBV25-1A0A075B6N4 114 aa11.17□□□□□ -0.62
CLIP2-203ENST00000395060 PRRG2O14669 202 aa11.17□□□□□ -0.62
CLIP2-203ENST00000395060 EFNA4P52798 201 aa11.17□□□□□ -0.62
CLIP2-203ENST00000395060 MAPKAPK5-AS1Q8N8E1 139 aa11.17□□□□□ -0.62
CLIP2-203ENST00000395060 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 TRGV3P03979 118 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 ODF1Q14990 250 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
CLIP2-203ENST00000395060 MRPL35Q9NZE8 188 aaKnown RBP11.16□□□□□ -0.62
CLIP2-203ENST00000395060 INSL3P51460 131 aa11.15□□□□□ -0.62
CLIP2-203ENST00000395060 Q6AWC8 147 aa11.15□□□□□ -0.62
CLIP2-203ENST00000395060 E7EQL1 145 aa11.15□□□□□ -0.62
CLIP2-203ENST00000395060 IGKCP01834 107 aa11.15□□□□□ -0.62
CLIP2-203ENST00000395060 MRPS12O15235 138 aaKnown RBP11.15□□□□□ -0.63
CLIP2-203ENST00000395060 IGF2-ASQ6U949 168 aa11.15□□□□□ -0.63
CLIP2-203ENST00000395060 NUP37Q8NFH4 326 aa11.15□□□□□ -0.63
CLIP2-203ENST00000395060 A0A1B0GW15 77 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 ASCL5Q7RTU5 278 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 DYNAPQ8N1N2 210 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 OR5A1Q8NGJ0 315 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 HHLA3Q9XRX5 114 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 ATP5G2Q06055 141 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
CLIP2-203ENST00000395060 NDPQ00604 133 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 PAX8Q06710 450 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 U3KQK5 164 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 CUBNO60494 3623 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
CLIP2-203ENST00000395060 TGFAP01135 160 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 CFHR4Q92496 578 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 Q8NA96 180 aa11.12□□□□□ -0.63
CLIP2-203ENST00000395060 NBR2O15453 112 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 MFAP4P55083 255 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms