RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NUDT3O95989 172 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 MAP1LC3CQ9BXW4 147 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 SAA4P35542 130 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 MRPL51Q4U2R6 128 aaKnown RBP10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 LYPD1Q8N2G4 141 aa10.44□□□□□ -0.74
GTF2F1-201ENST00000394456 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 MINOS1Q5TGZ0 78 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 FA2HQ7L5A8 372 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 CCL19Q99731 98 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 MINOS1-NBL1R4GNA1 71 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 ATP6V0E1O15342 81 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 FAM162BQ5T6X4 162 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 SCRT2Q9NQ03 307 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 SELENOKQ9Y6D0 94 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 COX11Q9Y6N1 276 aa10.43□□□□□ -0.74
GTF2F1-201ENST00000394456 NPYP01303 97 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 CLEC3BP05452 202 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 FOSL1P15407 271 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 CSN1S1P47710 185 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 PRELID3AQ96N28 172 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 UBE2E1P51965 193 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.42□□□□□ -0.742e-6■■■□□ 18.9
GTF2F1-201ENST00000394456 ANKRD17O75179 2603 aaKnown RBP10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 TWIST1Q15672 202 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 ANKRD39Q53RE8 183 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 LINC01545Q5VT33 79 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 TMEM219Q86XT9 240 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
GTF2F1-201ENST00000394456 IGHV4-61A0A0C4DH41 118 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 OOSP1A8MZH6 123 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 ORM1P02763 201 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 RHOGP84095 191 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 CLEC19AQ6UXS0 136 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 PSMG3-AS1Q96PY0 264 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 RNF24Q9Y225 148 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 C20orf202A1L168 122 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 RPL7P18124 248 aaKnown RBP10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 PDE6HQ13956 83 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 IL17RELQ6ZVW7 336 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 NRGNQ92686 78 aa10.41□□□□□ -0.74
GTF2F1-201ENST00000394456 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 CBY3A6NI87 242 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 SPRY2O43597 315 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 EVI2AP22794 236 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 EBI3Q14213 229 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
GTF2F1-201ENST00000394456 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.75
GTF2F1-201ENST00000394456 PRSS57Q6UWY2 283 aa10.4□□□□□ -0.75
GTF2F1-201ENST00000394456 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.75
GTF2F1-201ENST00000394456 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 ATP5J2P56134 94 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 OR10AG1Q8NH19 301 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 ZNF502Q8TBZ5 544 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 TAX1BP3O14907 124 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 NPFFO15130 113 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 DEFB1P60022 68 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 PSG9Q00887 426 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 ZNF48Q96MX3 618 aaPredicted RBP10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 PIMREGQ9BSJ6 248 aa10.39□□□□□ -0.75
GTF2F1-201ENST00000394456 HSBP1L1C9JCN9 74 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 CACNG7P62955 275 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 BRD3OSQ6XYD6 125 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 THYN1Q9P016 225 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 CKS2P33552 79 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 ORMDL3Q8N138 153 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 U3KQK5 164 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 ZANQ9Y493 2812 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 FBN2P35556 2912 aa10.38□□□□□ -0.75
GTF2F1-201ENST00000394456 IGHV4-30-2A0A087WSY4 118 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 ABCA12Q86UK0 2595 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 BUB3O43684 328 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 IGF1P05019 195 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 PAX8Q06710 450 aa10.37□□□□□ -0.75
GTF2F1-201ENST00000394456 C10orf105Q8TEF2 133 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms