RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 Q6ZSV7 163 aa10.16□□□□□ -0.78
SRSF5-201ENST00000394366 RHPN1-AS1Q9BWJ2 59 aa10.16□□□□□ -0.78
SRSF5-201ENST00000394366 GFRA4Q9GZZ7 299 aa10.16□□□□□ -0.78
SRSF5-201ENST00000394366 NRN1Q9NPD7 142 aa10.16□□□□□ -0.78
SRSF5-201ENST00000394366 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
SRSF5-201ENST00000394366 SAV1Q9H4B6 383 aaPredicted RBP10.15□□□□□ -0.78
SRSF5-201ENST00000394366 C16orf95Q9H693 158 aa10.15□□□□□ -0.78
SRSF5-201ENST00000394366 RNF114Q9Y508 228 aa10.15□□□□□ -0.78
SRSF5-201ENST00000394366 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.79
SRSF5-201ENST00000394366 C5orf52A6NGY3 159 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 PHOX2AO14813 284 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BKO60814 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BJP06899 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BOP23527 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BBP33778 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BDP58876 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BCP62807 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST2H2BEQ16778 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 TM4SF20Q53R12 229 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.15□□□□□ -0.79
SRSF5-201ENST00000394366 ATP5L2Q7Z4Y8 100 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 FRZBQ92765 325 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BHQ93079 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 PRR25Q96S07 402 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BNQ99877 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 HIST1H2BMQ99879 126 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.79
SRSF5-201ENST00000394366 STAB1Q9NY15 2570 aa10.14□□□□□ -0.79
SRSF5-201ENST00000394366 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
SRSF5-201ENST00000394366 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
SRSF5-201ENST00000394366 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
SRSF5-201ENST00000394366 PPP1R14DQ9NXH3 145 aa10.14□□□□□ -0.79
SRSF5-201ENST00000394366 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 UBE2CO00762 179 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 OVOL1O14753 267 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
SRSF5-201ENST00000394366 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 TMEM78Q5T7P6 136 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
SRSF5-201ENST00000394366 IGHV4OR15-8A0A075B7B6 117 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 A0A087WW49 117 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
SRSF5-201ENST00000394366 M0QZ24 198 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 SOCS3O14543 225 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 HOXD3P31249 432 aaPredicted RBP10.12□□□□□ -0.79
SRSF5-201ENST00000394366 ID1P41134 155 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 TCL1AP56279 114 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 RPL11P62913 178 aaKnown RBP10.12□□□□□ -0.79
SRSF5-201ENST00000394366 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 Q6AWC8 147 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 LINC00322Q6ZN03 302 aaPredicted RBP10.12□□□□□ -0.79
SRSF5-201ENST00000394366 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 RNF182Q8N6D2 247 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
SRSF5-201ENST00000394366 NEU1Q99519 415 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 VGLL1Q99990 258 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 LENEPQ9Y5L5 61 aa10.12□□□□□ -0.79
SRSF5-201ENST00000394366 TMEM213A2RRL7 107 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 HIGD1CA8MV81 97 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 LINC01619G3V211 115 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 CA1P00915 261 aaPredicted RBP10.11□□□□□ -0.79
SRSF5-201ENST00000394366 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 PROK1P58294 105 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 TCF24Q7RTU0 167 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 NUP35Q8NFH5 326 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 DPF1Q92782 380 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 ANK2Q01484 3957 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 SNURFLB1AK76 121 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 ZNF138P52744 262 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 FOXA3P55318 350 aaPredicted RBP10.11□□□□□ -0.79
SRSF5-201ENST00000394366 NDUFA6P56556 154 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 RPS20P60866 119 aaKnown RBP10.11□□□□□ -0.79
SRSF5-201ENST00000394366 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
SRSF5-201ENST00000394366 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
SRSF5-201ENST00000394366 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 OR10J6PQ8NGY7 276 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 PEMTQ9UBM1 199 aa10.11□□□□□ -0.79
SRSF5-201ENST00000394366 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
SRSF5-201ENST00000394366 SYNJ2BPP57105 145 aa10.1□□□□□ -0.79
SRSF5-201ENST00000394366 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
SRSF5-201ENST00000394366 ASCL2Q99929 193 aa10.1□□□□□ -0.79
SRSF5-201ENST00000394366 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
SRSF5-201ENST00000394366 HOXA5P20719 270 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 CBLN1P23435 193 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 KRTAP10-3P60369 221 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 CITED1Q99966 193 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
SRSF5-201ENST00000394366 TRBV7-9A0A0J9YWB2 115 aa10.08□□□□□ -0.8
SRSF5-201ENST00000394366 A0A1B0GW15 77 aa10.08□□□□□ -0.8
SRSF5-201ENST00000394366 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
SRSF5-201ENST00000394366 FABP5P3A8MUU1 101 aa10.08□□□□□ -0.8
SRSF5-201ENST00000394366 SH2D1AO60880 128 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms