RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 LEAP2Q969E1 77 aa17.15■□□□□ 0.34
CLDND1-202ENST00000394180 MRPL36Q9P0J6 103 aaKnown RBP17.15■□□□□ 0.34
CLDND1-202ENST00000394180 RPUSD1Q9UJJ7 312 aaKnown RBP17.15■□□□□ 0.34
CLDND1-202ENST00000394180 EPG5Q9HCE0 2579 aa17.14■□□□□ 0.33
CLDND1-202ENST00000394180 CGB1A6NKQ9 187 aa17.14■□□□□ 0.33
CLDND1-202ENST00000394180 IGKV3-15P01624 115 aa17.14■□□□□ 0.33
CLDND1-202ENST00000394180 HOXA4Q00056 320 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-202ENST00000394180 SRSF2Q01130 221 aaKnown RBP17.14■□□□□ 0.33
CLDND1-202ENST00000394180 MBD3L4A6NDZ8 208 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-202ENST00000394180 MBD3L3A6NE82 208 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-202ENST00000394180 MBD3L5A6NJ08 208 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-202ENST00000394180 CRIP1P50238 77 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 Q6Q795 121 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 GTSCR1Q86UQ5 136 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 MBD3L2Q8NHZ7 208 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-202ENST00000394180 NCBP2LA6PVI3 153 aaKnown RBP17.13■□□□□ 0.33
CLDND1-202ENST00000394180 ZNF688P0C7X2 276 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 PLNP26678 52 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 LEPP41159 167 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 FHL3Q13643 280 aa17.13■□□□□ 0.33
CLDND1-202ENST00000394180 ASIPP42127 132 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 UTF1Q5T230 341 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 SHISA2Q6UWI4 295 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 TTTY13Q9BZ97 58 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 PCNX1Q96RV3 2341 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 CFAP46Q8IYW2 2715 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 TRBV20-1A0A075B6N2 111 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 TMEM213A2RRL7 107 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 RHODO00212 210 aa17.12■□□□□ 0.33
CLDND1-202ENST00000394180 ZNRF1Q8ND25 227 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 OR4C13Q8NGP0 309 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 UFC1Q9Y3C8 167 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 ZFYVE26Q68DK2 2539 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 TRBV19A0A075B6N1 114 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 LHBP01229 141 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 UBE2D3P61077 147 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 UBE2D2P62837 147 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 MAPKAPK5-AS1Q8N8E1 139 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 FOXC2Q99958 501 aa17.11■□□□□ 0.33
CLDND1-202ENST00000394180 PRSS29PA6NIE9 313 aa17.1■□□□□ 0.33
CLDND1-202ENST00000394180 TNFRSF1AP19438 455 aa17.1■□□□□ 0.33
CLDND1-202ENST00000394180 PLGLAQ15195 96 aa17.1■□□□□ 0.33
CLDND1-202ENST00000394180 CNFNQ9BYD5 112 aa17.1■□□□□ 0.33
CLDND1-202ENST00000394180 POLEQ07864 2286 aa17.1■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE12JA6NER3 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 E7EUB6 86 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE7O76087 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE12FP0CL80 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE12GP0CL81 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE12IP0CL82 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 IGHV1-2P23083 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 GAGE4Q13068 117 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 RPEQ96AT9 228 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 CARD19Q96LW7 228 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 B5MCH6 92 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 LYZL6O75951 148 aa17.09■□□□□ 0.33
CLDND1-202ENST00000394180 C1orf162Q8NEQ5 155 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-202ENST00000394180 A0A087WX48 190 aa17.08■□□□□ 0.33
CLDND1-202ENST00000394180 RBP4P02753 201 aa17.08■□□□□ 0.33
CLDND1-202ENST00000394180 NHLRC4P0CG21 123 aaPredicted RBP17.08■□□□□ 0.33
CLDND1-202ENST00000394180 FXYD7P58549 80 aa17.08■□□□□ 0.33
CLDND1-202ENST00000394180 EXOC3-AS1Q8N2X6 119 aa17.08■□□□□ 0.33
CLDND1-202ENST00000394180 Q8N8P6 123 aa17.08■□□□□ 0.33
CLDND1-202ENST00000394180 TPPP3Q9BW30 176 aa17.08■□□□□ 0.32
CLDND1-202ENST00000394180 MYMXA0A1B0GTQ4 84 aa17.07■□□□□ 0.32
CLDND1-202ENST00000394180 SIGLEC15Q6ZMC9 328 aa17.07■□□□□ 0.32
CLDND1-202ENST00000394180 TRAV12-1A0A0B4J245 112 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 IGLC6P0CF74 106 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 UBE2D1P51668 147 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 HERV-K104P63124 156 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 Q6ZT83 130 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 NGBQ9NPG2 151 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 TNFRSF18Q9Y5U5 241 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 TNCP24821 2201 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 RPL32P62910 135 aaKnown RBP17.06■□□□□ 0.32
CLDND1-202ENST00000394180 PROCRQ9UNN8 238 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 DSCAML1Q8TD84 2053 aa17.06■□□□□ 0.32
CLDND1-202ENST00000394180 PRR14LQ5THK1 2151 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 TRAV40A0A0B4J280 105 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 A0A0G2JNJ9 132 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 CENPVL3A0A0U1RRI6 287 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 PPIFP30405 207 aaKnown RBP17.05■□□□□ 0.32
CLDND1-202ENST00000394180 PDE6HQ13956 83 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 OR11H6Q8NGC7 330 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 MYOZ3Q8TDC0 251 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 RNF185Q96GF1 192 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 MRPL20Q9BYC9 149 aaKnown RBP17.05■□□□□ 0.32
CLDND1-202ENST00000394180 Q9UFV3 132 aa17.05■□□□□ 0.32
CLDND1-202ENST00000394180 A0A1W2PPI3 338 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 A8MWV9 139 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 H3BTX0 84 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 VMA21Q3ZAQ7 101 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 C1orf122Q6ZSJ8 110 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 GLMPQ8WWB7 406 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 TMEM160Q9NX00 188 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 SHANK2-AS3Q9BTD1 123 aa17.04■□□□□ 0.32
CLDND1-202ENST00000394180 MRPL35Q9NZE8 188 aaKnown RBP17.04■□□□□ 0.32
CLDND1-202ENST00000394180 SH2D1AO60880 128 aa17.03■□□□□ 0.32
CLDND1-202ENST00000394180 TNFRSF6BO95407 300 aa17.03■□□□□ 0.32
CLDND1-202ENST00000394180 IGLV2-23P01705 113 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms