RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 RPL27AP46776 148 aaKnown RBP7.85□□□□□ -1.15
PSEN1-204ENST00000394164 ZNF672Q499Z4 452 aaPredicted RBP7.85□□□□□ -1.15
PSEN1-204ENST00000394164 AMN1Q8IY45 258 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 CRYBG3Q68DQ2 2970 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 UTP20O75691 2785 aaKnown RBP7.85□□□□□ -1.15
PSEN1-204ENST00000394164 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 A0A1B0GWB2 263 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 B9A039 149 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 NDUFS7O75251 213 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 SUB1P53999 127 aaKnown RBP eCLIP7.85□□□□□ -1.15
PSEN1-204ENST00000394164 LYZP61626 148 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 LY6DQ14210 128 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 MRAP2Q96G30 205 aa7.85□□□□□ -1.15
PSEN1-204ENST00000394164 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.85□□□□□ -1.15
PSEN1-204ENST00000394164 TCRAP04437 139 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 MRGPRG-AS1Q2M3A8 158 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 OR1L4Q8NGR5 311 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 TCRBV4S1A1TA0A5B7 111 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 HAX1O00165 279 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 GLMPQ8WWB7 406 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 ZNF479Q96JC4 524 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 PRELID3AQ96N28 172 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 AGRNO00468 2067 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 PIEZO1Q92508 2521 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 PKD1L2Q7Z442 2459 aa7.84□□□□□ -1.15
PSEN1-204ENST00000394164 TMEM189A5PLL7 270 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 TIMM23O14925 209 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 IGHV3-23P01764 117 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 MT-ATP8P03928 68 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 SPINK8P0C7L1 97 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 SYT8Q8NBV8 401 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 RNF183Q96D59 192 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 SPATA25Q9BR10 227 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 SIGLEC9Q9Y336 463 aa7.84□□□□□ -1.16
PSEN1-204ENST00000394164 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.16
PSEN1-204ENST00000394164 FLNCQ14315 2725 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 RIGQ13278 110 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 LGALS9BQ3B8N2 356 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 ANXA2RQ3ZCQ2 193 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 GAGE13Q4V321 117 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 PPP1R27Q86WC6 154 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 IGHV3-35A0A0C4DH35 117 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 IGLL5B9A064 214 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 MYCNOSP40205 109 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 Q86TA4 180 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 CACNG8Q8WXS5 425 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 FMC1Q96HJ9 113 aa7.83□□□□□ -1.16
PSEN1-204ENST00000394164 MYO18BQ8IUG5 2567 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 CSMD2Q7Z408 3487 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 PRSS1P07477 247 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 APOMO95445 188 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 FSTL3O95633 263 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 HBDP02042 147 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 TMEM30BQ3MIR4 351 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
PSEN1-204ENST00000394164 TRBV25-1A0A075B6N4 114 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 NCBP2LA6PVI3 153 aaKnown RBP7.81□□□□□ -1.16
PSEN1-204ENST00000394164 F8W1H4 67 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 IGLV1-47P01700 117 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 ADORA2A-AS1P86434 159 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 C17orf77Q96MU5 243 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 KAAG1Q9UBP8 84 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 KLF12Q9Y4X4 402 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 POLQO75417 2590 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 CT83Q5H943 113 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 PHLDA1Q8WV24 401 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-204ENST00000394164 GFRA4Q9GZZ7 299 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 ZNF492Q9P255 531 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 SIVA1O15304 175 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 TGFAP01135 160 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 TCTEX1D4Q5JR98 221 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 ZNF418Q8TF45 676 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-204ENST00000394164 PTH2Q96A98 100 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 TMEM160Q9NX00 188 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 MRPL16Q9NX20 251 aaKnown RBP7.81□□□□□ -1.16
PSEN1-204ENST00000394164 CFAP46Q8IYW2 2715 aa7.81□□□□□ -1.16
PSEN1-204ENST00000394164 GAS8-AS1O95177 125 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 NPYP01303 97 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 EVI2AP22794 236 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 CEND1Q8N111 149 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 CSPG4Q6UVK1 2322 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 FAM208BQ5VWN6 2430 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 ZNF785A8K8V0 405 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 CKS2P33552 79 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 C8orf49Q96NF6 230 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 FOXC2Q99958 501 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 CELSR2Q9HCU4 2923 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 ACACBO00763 2458 aa7.8□□□□□ -1.16
PSEN1-204ENST00000394164 LINC01548A6NM66 108 aa7.79□□□□□ -1.16
PSEN1-204ENST00000394164 TEX22C9J3V5 150 aa7.79□□□□□ -1.16
PSEN1-204ENST00000394164 E9PLD3 99 aa7.79□□□□□ -1.16
PSEN1-204ENST00000394164 OVOL3O00110 214 aa7.79□□□□□ -1.16
PSEN1-204ENST00000394164 ZC2HC1BQ5TFG8 222 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms