RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 A0A096LPF7 62 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 TRAV5A0A0B4J249 113 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 C7orf71A4D174 169 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 BCAP31P51572 246 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 DEFA1P59665 94 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 DEFA3P59666 94 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
SNRPA1-202ENST00000394082 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 CST7O76096 145 aa12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 HIST1H1EP10412 219 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 CRISP2P16562 243 aa12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 SULT1A1P50225 295 aa12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 IBA57Q5T440 356 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 C2orf50Q96LR7 162 aa12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-202ENST00000394082 J3KRW8 73 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 CCSO14618 274 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 MPDU1O75352 247 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 NDUFB4O95168 129 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 HBG1P69891 147 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 HBG2P69892 147 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 ATP6V1FQ16864 119 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 GSN-AS1Q9NRJ2 163 aa12.03□□□□□ -0.48
SNRPA1-202ENST00000394082 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 FAM25EA8MYX2 175 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 M0R3E3 92 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 SPINK4O60575 86 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 TCL1AP56279 114 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 IL15RAQ13261 267 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 Q6ZRN7 208 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 STX12Q86Y82 276 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 GPN1Q9HCN4 374 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 FUT9Q9Y231 359 aa12.02□□□□□ -0.49
SNRPA1-202ENST00000394082 C5orf51A6NDU8 294 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 IFITM3Q01628 133 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 BAXQ07812 192 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 SLAQ13239 276 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 ST6GAL2Q96JF0 529 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 AGPAT4-IT1Q9H0P7 198 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 SCRT2Q9NQ03 307 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
SNRPA1-202ENST00000394082 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 TRBV7-9A0A0J9YWB2 115 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 SIVA1O15304 175 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 LINC00315P59091 139 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 CD300CQ08708 224 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
SNRPA1-202ENST00000394082 ERCC8Q13216 396 aa11.99□□□□□ -0.49
SNRPA1-202ENST00000394082 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
SNRPA1-202ENST00000394082 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
SNRPA1-202ENST00000394082 ICOSQ9Y6W8 199 aa11.99□□□□□ -0.49
SNRPA1-202ENST00000394082 IGSF23A1L1A6 192 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 K7EP13 123 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 GPX1P07203 203 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 FGF7P21781 194 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 VGLL1Q99990 258 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
SNRPA1-202ENST00000394082 INMT-MINDY4F8WBC2 141 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 PAX4O43316 350 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 PRAF2O60831 178 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 PYYP10082 97 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 RAB32Q13637 225 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 EXOC3-AS1Q8N2X6 119 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 NPCDR1Q9BY65 106 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
SNRPA1-202ENST00000394082 S100A10P60903 97 aa11.96□□□□□ -0.49
SNRPA1-202ENST00000394082 NFE4Q86UQ8 179 aa11.96□□□□□ -0.49
SNRPA1-202ENST00000394082 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
SNRPA1-202ENST00000394082 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
SNRPA1-202ENST00000394082 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 RGS13O14921 159 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 EREGO14944 169 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 NXPH4O95158 308 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 CRYBA4P53673 196 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 ICAM4Q14773 271 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 BLNKQ8WV28 456 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 HHLA3Q9XRX5 114 aa11.95□□□□□ -0.5
SNRPA1-202ENST00000394082 RBAKDNA6NC62 111 aa11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 ZNF138P52744 262 aa11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 ERVFC1-1P60608 527 aa11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 MARVELD1Q9BSK0 173 aa11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 MRPL32Q9BYC8 188 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 KCNIP2Q9NS61 270 aa11.94□□□□□ -0.5
SNRPA1-202ENST00000394082 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms