RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 A0A1W2PS18 150 aa15.36■□□□□ 0.05
PTPN11-202ENST00000392597 ZNF705FA8MVS1 300 aaPredicted RBP15.36■□□□□ 0.05
PTPN11-202ENST00000392597 A8MWP6 167 aa15.36■□□□□ 0.05
PTPN11-202ENST00000392597 BAGE3Q86Y29 109 aa15.36■□□□□ 0.05
PTPN11-202ENST00000392597 NDFIP1Q9BT67 221 aa15.36■□□□□ 0.05
PTPN11-202ENST00000392597 ACANP16112 2415 aa15.36■□□□□ 0.05
PTPN11-202ENST00000392597 TRAV8-2A0A0B4J237 113 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 JOSD1Q15040 202 aaPredicted RBP15.35■□□□□ 0.05
PTPN11-202ENST00000392597 KIAA1644Q3SXP7 199 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 ASCL2Q99929 193 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 HAX1O00165 279 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 SRIP30626 198 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 CAMPP49913 170 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 LINC00310P59036 64 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 PAFAH1B2P68402 229 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 TMEM95Q3KNT9 176 aa15.35■□□□□ 0.05
PTPN11-202ENST00000392597 PEF1Q9UBV8 284 aaKnown RBP15.35■□□□□ 0.05
PTPN11-202ENST00000392597 NUPR1O60356 82 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 SH2D1AO60880 128 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 SERF1AO75920 110 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 PRB4P10163 310 aaPredicted RBP15.34■□□□□ 0.05
PTPN11-202ENST00000392597 BMI1P35226 326 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 RNF182Q8N6D2 247 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 TEX29Q8N6K0 151 aa15.34■□□□□ 0.05
PTPN11-202ENST00000392597 A0A1B0GW15 77 aa15.33■□□□□ 0.05
PTPN11-202ENST00000392597 GZMBP10144 247 aa15.33■□□□□ 0.05
PTPN11-202ENST00000392597 LCNL1Q6ZST4 164 aa15.33■□□□□ 0.05
PTPN11-202ENST00000392597 A0A1B0GUT8 65 aa15.33■□□□□ 0.04
PTPN11-202ENST00000392597 PRAC2D3DTV9 90 aa15.33■□□□□ 0.04
PTPN11-202ENST00000392597 SMAD7O15105 426 aaKnown RBP15.33■□□□□ 0.04
PTPN11-202ENST00000392597 SRSF2Q01130 221 aaKnown RBP15.33■□□□□ 0.04
PTPN11-202ENST00000392597 Q8TAT8 98 aa15.33■□□□□ 0.04
PTPN11-202ENST00000392597 MXRA5Q9NR99 2828 aa15.32■□□□□ 0.04
PTPN11-202ENST00000392597 TLN2Q9Y4G6 2542 aa15.32■□□□□ 0.04
PTPN11-202ENST00000392597 TMEM189A5PLL7 270 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 K7EMT4 169 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 HOXA3O43365 443 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-202ENST00000392597 RPS20P60866 119 aaKnown RBP15.31■□□□□ 0.04
PTPN11-202ENST00000392597 RIGQ13278 110 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 ZNF702PQ9H963 129 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 DAZ1Q9NQZ3 744 aaKnown RBP15.31■□□□□ 0.04
PTPN11-202ENST00000392597 GSN-AS1Q9NRJ2 163 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 PPP1R14DQ9NXH3 145 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 FOXE3Q13461 319 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 KLF5Q13887 457 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-202ENST00000392597 FAM106AQ4KMX7 169 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 GPHB5Q86YW7 130 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 C16orf92Q96LL3 132 aa15.31■□□□□ 0.04
PTPN11-202ENST00000392597 SSBP4Q9BWG4 385 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-202ENST00000392597 MAST4O15021 2626 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 IGHV7-4-1A0A0J9YVY3 117 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 F2Z2F3 143 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 ELANEP08246 267 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 C9orf47Q6ZRZ4 202 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 GATD1Q8NB37 220 aa15.3■□□□□ 0.04
PTPN11-202ENST00000392597 ALKBH7Q9BT30 221 aaPredicted RBP15.3■□□□□ 0.04
PTPN11-202ENST00000392597 ERCC8Q13216 396 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 C18orf32Q8TCD1 76 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 TMEM78Q5T7P6 136 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 MYOZ3Q8TDC0 251 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 BORCS7Q96B45 105 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 KCNS1Q96KK3 526 aa15.29■□□□□ 0.04
PTPN11-202ENST00000392597 FABP5P3A8MUU1 101 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 SOCS3O14543 225 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 FOSL1P15407 271 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 ZNF80P51504 273 aaPredicted RBP15.28■□□□□ 0.04
PTPN11-202ENST00000392597 ZNF138P52744 262 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 CDPF1Q6NVV7 123 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 AGPAT4-IT1Q9H0P7 198 aa15.28■□□□□ 0.04
PTPN11-202ENST00000392597 ARMS2P0C7Q2 107 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 Q8N2B8 174 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 RNF152Q8N8N0 203 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 RHPN1-AS1Q9BWJ2 59 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 SMPXQ9UHP9 88 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 HIVEP1P15822 2718 aa15.27■□□□□ 0.04
PTPN11-202ENST00000392597 KRTAP1-1Q07627 177 aa15.27■□□□□ 0.03
PTPN11-202ENST00000392597 IL17RELQ6ZVW7 336 aa15.27■□□□□ 0.03
PTPN11-202ENST00000392597 SAMD10Q9BYL1 202 aa15.27■□□□□ 0.03
PTPN11-202ENST00000392597 UFC1Q9Y3C8 167 aa15.27■□□□□ 0.03
PTPN11-202ENST00000392597 LENEPQ9Y5L5 61 aa15.27■□□□□ 0.03
PTPN11-202ENST00000392597 CD5LO43866 347 aa15.26■□□□□ 0.03
PTPN11-202ENST00000392597 TM4SF20Q53R12 229 aa15.26■□□□□ 0.03
PTPN11-202ENST00000392597 TMEM86BQ8N661 226 aa15.26■□□□□ 0.03
PTPN11-202ENST00000392597 RCHY1Q96PM5 261 aa15.26■□□□□ 0.03
PTPN11-202ENST00000392597 GPX1P07203 203 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 SAMD13Q5VXD3 122 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 LOC102724200A0A096LPH7 203 aaPredicted RBP15.25■□□□□ 0.03
PTPN11-202ENST00000392597 RPLP1P05386 114 aaKnown RBP15.25■□□□□ 0.03
PTPN11-202ENST00000392597 CTRLP40313 264 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 HIST1H1AQ02539 215 aaPredicted RBP15.25■□□□□ 0.03
PTPN11-202ENST00000392597 IQCJQ1A5X6 159 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 SIGLECL1Q8N7X8 197 aa15.25■□□□□ 0.03
PTPN11-202ENST00000392597 F8P00451 2351 aa15.24■□□□□ 0.03
PTPN11-202ENST00000392597 OVOL1O14753 267 aa15.24■□□□□ 0.03
PTPN11-202ENST00000392597 LGALS1P09382 135 aaKnown RBP15.24■□□□□ 0.03
PTPN11-202ENST00000392597 LINC01559Q495D7 138 aa15.24■□□□□ 0.03
PTPN11-202ENST00000392597 ZNF738Q8NE65 137 aa15.24■□□□□ 0.03
PTPN11-202ENST00000392597 C20orf173Q96LM9 149 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms