RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 RNF182Q8N6D2 247 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 TSKUQ8WUA8 353 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 FRZBQ92765 325 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 DAZAP1Q96EP5 407 aaKnown RBP8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.01
SMARCAL1-203ENST00000392128 A8MWP6 167 aa8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 LGALS9O00182 355 aa8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 RNASE1P07998 156 aaKnown RBP8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 PRB4P10163 310 aaPredicted RBP8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 Q71RC1 249 aaPredicted RBP8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 OR4B1Q8NGF8 309 aa8.71□□□□□ -1.02
SMARCAL1-203ENST00000392128 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 A0A087WW49 117 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 IZUMO1RA6ND01 250 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 SOCS3O14543 225 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 SRD5A1P18405 259 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 CDX1P47902 265 aaPredicted RBP8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 VGLL1Q99990 258 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 TMEM213A2RRL7 107 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 TCL1AP56279 114 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 C8orf49Q96NF6 230 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 PRR25Q96S07 402 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 SMR3AQ99954 134 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 NRN1Q9NPD7 142 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 NAT8BQ9UHF3 227 aa8.7□□□□□ -1.02
SMARCAL1-203ENST00000392128 A8MWL6 223 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 PRAC2D3DTV9 90 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 ZNF418Q8TF45 676 aaPredicted RBP8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 WIPF2Q8TF74 440 aaPredicted RBP8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 C4orf3Q8WVX3 66 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 ASCL2Q99929 193 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 GFRA4Q9GZZ7 299 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 GOLT1BQ9Y3E0 138 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 TRAPPC1Q9Y5R8 145 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 LY6G6DO95868 133 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 HILS1P60008 231 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 COX19Q49B96 90 aa8.69□□□□□ -1.02
SMARCAL1-203ENST00000392128 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 DDTP30046 118 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 CRIP1P50238 77 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 FABP9Q0Z7S8 132 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 WFDC12Q8WWY7 111 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 NDFIP1Q9BT67 221 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 GNB1LQ9BYB4 327 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 HIGD1CA8MV81 97 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 EDN2P20800 178 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 SYNJ2BPP57105 145 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 SAMD13Q5VXD3 122 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 RASL11AQ6T310 242 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 Q8TAT8 98 aa8.68□□□□□ -1.02
SMARCAL1-203ENST00000392128 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 ERCC8Q13216 396 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 KLF5Q13887 457 aaPredicted RBP8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 WDR73Q6P4I2 378 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 C18orf65Q6ZTR6 163 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 C20orf173Q96LM9 149 aa8.67□□□□□ -1.02
SMARCAL1-203ENST00000392128 MT-ND6P03923 174 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 CBLN1P23435 193 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 NDUFA6P56556 154 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 RBX1P62877 108 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 FAM162BQ5T6X4 162 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 OR2D3Q8NGH3 330 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 AGPAT4-IT1Q9H0P7 198 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 LINC01619G3V211 115 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 DLEU1O43261 78 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 SPINK4O60575 86 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 FRMD6-AS1P0C7T7 363 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 PKIAP61925 76 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 ATP5L2Q7Z4Y8 100 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 CUBNO60494 3623 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 NOTCH2Q04721 2471 aa8.66□□□□□ -1.02
SMARCAL1-203ENST00000392128 SNURFLB1AK76 121 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 OVOL1O14753 267 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 CDKN1BP46527 198 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 ZNF138P52744 262 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 MRPL54Q6P161 138 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 TMEM136Q6ZRR5 245 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 JMJD8Q96S16 334 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 SH2D1AO60880 128 aa8.65□□□□□ -1.02
SMARCAL1-203ENST00000392128 HOXA5P20719 270 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms