RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PARD6GQ9BYG4 376 aaPredicted RBP9.51□□□□□ -0.89
TRBV4-1-201ENST00000390357 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
TRBV4-1-201ENST00000390357 AGPAT4-IT1Q9H0P7 198 aa9.51□□□□□ -0.89
TRBV4-1-201ENST00000390357 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
TRBV4-1-201ENST00000390357 GAGE12BA1L429 117 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 M0R3E3 92 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 GAGE7O76087 117 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 GAGE12FP0CL80 117 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 GAGE12GP0CL81 117 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 GAGE12IP0CL82 117 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 PYYP10082 97 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 BTF3P20290 206 aaKnown RBP9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 PAXXQ9BUH6 204 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 PTTG2Q9NZH5 202 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 FUT9Q9Y231 359 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 LINC00588Q9Y4M8 146 aa9.5□□□□□ -0.89
TRBV4-1-201ENST00000390357 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 J3KRW8 73 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 SIX6O95475 246 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 CSN1S1P47710 185 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 ICAM4Q14773 271 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 LRRC37A5PQ49AS3 106 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 EXOC3-AS1Q8N2X6 119 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 THAP6Q8TBB0 222 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 PPP1R1CQ8WVI7 109 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 Q9H8V8 135 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 OR5AC2Q9NZP5 309 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 ZNF492Q9P255 531 aa9.49□□□□□ -0.89
TRBV4-1-201ENST00000390357 IFNA5P01569 189 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 PRB4P10163 310 aaPredicted RBP9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 TAS2R45P59539 299 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 ERCC8Q13216 396 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 SLAQ13239 276 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 ATP5SQ99766 215 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
TRBV4-1-201ENST00000390357 TRGV2A0A075B6R0 118 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 A0A1W2PPQ1 181 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 H0YIZ8 118 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 RGS13O14921 159 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 SSNA1O43805 119 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 ZNF138P52744 262 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 IFITM3Q01628 133 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 GCSAMLQ5JQS6 135 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 ARL6IP6Q8N6S5 226 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 FXYD5Q96DB9 178 aa9.47□□□□□ -0.89
TRBV4-1-201ENST00000390357 SPINK4O60575 86 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 MPC2O95563 127 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 HOXA5P20719 270 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 TCL1AP56279 114 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 H2BFSP57053 126 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 CD300CQ08708 224 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 FAM74A1Q5RGS3 127 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 GSN-AS1Q9NRJ2 163 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 HSPB11Q9Y547 144 aa9.46□□□□□ -0.9
TRBV4-1-201ENST00000390357 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 OR7C2O60412 319 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 BTN1A1Q13410 526 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 Q6ZTI0 123 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 TMED6Q8WW62 240 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
TRBV4-1-201ENST00000390357 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 A0A0J9YY99 117 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 OR10J4P0C629 311 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 RANP62826 216 aaKnown RBP9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 ESRGQ1W209 222 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 VGLL1Q99990 258 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 BATF3Q9NR55 127 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 MRPS16Q9Y3D3 137 aaKnown RBP9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
TRBV4-1-201ENST00000390357 IGKV2-40A0A087WW87 121 aaPredicted RBP9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 A0A1W2PPV4 95 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 IGKV2D-40P01614 121 aaPredicted RBP9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 ZNF266Q14584 549 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 ST6GAL2Q96JF0 529 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 Q9H3A6 140 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 TMPRSS5Q9H3S3 457 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
TRBV4-1-201ENST00000390357 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
TRBV4-1-201ENST00000390357 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms