RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 WFDC11Q8NEX6 87 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 PSMB2P49721 201 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 FOXC2Q99958 501 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 PMCHL2Q9BQD1 86 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 LY96Q9Y6Y9 160 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 PPBPP02775 128 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 DDTP30046 118 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 C14orf178Q8N769 122 aaPredicted RBP10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 IGKV1-17P01599 117 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 HOXD3P31249 432 aaPredicted RBP10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM101Q96IK0 257 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 ATP5LO75964 103 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 ARMS2P0C7Q2 107 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 INSP01308 110 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 LINC00614P0C842 121 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM190Q8WZ59 177 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 ST6GALNAC6Q969X2 333 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 C1QTNF4Q9BXJ3 329 aa10.3□□□□□ -0.76
PTPRN2-202ENST00000389416 DOPEY1Q5JWR5 2465 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 IGHV7-4-1A0A0J9YVY3 117 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 ATP5L2Q7Z4Y8 100 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 LSM4Q9Y4Z0 139 aaKnown RBP10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 IGLV2-23P01705 113 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 ACANP16112 2415 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 D6R8Y8 96 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 FXYD5Q96DB9 178 aa10.29□□□□□ -0.76
PTPRN2-202ENST00000389416 IGLV11-55A0A075B6I3 123 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 A0A1B0GV90 55 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 H3BUA1 57 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 I3L2K1 104 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 HOXA5P20719 270 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 ASPHD1Q5U4P2 390 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 A0A087WWL8 130 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 K7ERU9 68 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 SLC25A34Q6PIV7 304 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
PTPRN2-202ENST00000389416 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.76
PTPRN2-202ENST00000389416 COL5A1-AS1Q5SY13 56 aa10.27□□□□□ -0.76
PTPRN2-202ENST00000389416 AJUBAQ96IF1 538 aa10.27□□□□□ -0.76
PTPRN2-202ENST00000389416 SMPXQ9UHP9 88 aa10.27□□□□□ -0.76
PTPRN2-202ENST00000389416 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.76
PTPRN2-202ENST00000389416 F6UB75 175 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 GSN-AS1Q9NRJ2 163 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 TMEM14CQ9P0S9 112 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 LINC00587B1AMM8 73 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 CCL24O00175 119 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 CTSGP08311 255 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 MEIG1Q5JSS6 88 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 C11orf71Q6IPW1 123 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 NIT1Q86X76 327 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 PRR25Q96S07 402 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 SNAI2O43623 268 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
PTPRN2-202ENST00000389416 C5orf52A6NGY3 159 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 SLURP1P55000 103 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 DYNAPQ8N1N2 210 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 VGLL1Q99990 258 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 LAMA2P24043 3122 aaKnown RBP10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 H7C2G1 150 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 GCSHP23434 173 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.775e-7■□□□□ 8.8
PTPRN2-202ENST00000389416 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 CHCHD5Q9BSY4 110 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 MRPL36Q9P0J6 103 aaKnown RBP10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 IGKV3D-20A0A0C4DH25 116 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 TSSC4Q9Y5U2 329 aaPredicted RBP10.26□□□□□ -0.77
PTPRN2-202ENST00000389416 HBDP02042 147 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 BRWD1-AS2P59051 145 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 C14orf144Q96I85 54 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 VCX2Q9H322 139 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 UQCR10Q9UDW1 63 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
PTPRN2-202ENST00000389416 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms