RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 DCUN1D1Q96GG9 259 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 OR4C12Q96R67 309 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 CMSS1Q9BQ75 279 aaKnown RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 CNFNQ9BYD5 112 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 OR52A5Q9H2C5 316 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 TREM1Q9NP99 234 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 FAT2Q9NYQ8 4349 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 KIAA0100Q14667 2235 aaKnown RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 CPDO75976 1380 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 N4BP2Q86UW6 1770 aaPredicted RBP-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 DLEC1Q9Y238 1755 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 FMN1Q68DA7 1419 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 LAMC1P11047 1609 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 TRAV22A0A0B4J277 110 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 A0A0D9SFI3 127 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 C3orf85A0A1B0GTC6 90 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 hADV38S2A0JD32 116 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 BBIP1A8MTZ0 92 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 LRRN3E7EW58 273 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 K7ERJ3 54 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 RER1O15258 196 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 CHP2O43745 196 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 CALUO43852 315 aaPredicted RBP-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 TTRP02766 147 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 IQCJQ1A5X6 159 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 ACOT6Q3I5F7 207 aaPredicted RBP-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 CLEC6AQ6EIG7 209 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 IFT20Q8IY31 132 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 OR6V1Q8N148 313 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 LINC00269Q8N2A0 174 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 TEX37Q96LM6 180 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 EFCAB11Q9BUY7 163 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 CACYBPQ9HB71 228 aaKnown RBP-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 COA4Q9NYJ1 87 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 GLTPQ9NZD2 209 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 COMMD3Q9UBI1 195 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 BCL9LQ86UU0 1499 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 NUP210LQ5VU65 1888 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 PI4KAP42356 2102 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 FRMPD1Q5SYB0 1578 aa-0.7□□□□□ -2.52
SNORD28-201ENST00000384706 USH2AO75445 5202 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TRPM1Q7Z4N2 1603 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 PLXNA1Q9UIW2 1896 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 NEBP20929 6669 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TRAV17A0A0B4J275 112 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM30CPA0ZSE6 113 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TPST1O60507 370 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 DCTN3O75935 186 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 CNIH1O95406 144 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 IGKCP01834 107 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 C1QBP02746 253 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 IFNA4P05014 189 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 S100A9P06702 114 aaKnown RBP-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 CRHP06850 196 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 OCM2P0CE71 109 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 PYYP10082 97 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 IL7P13232 177 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 PSMB6P28072 239 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 GLRXP35754 106 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 ARPP19P56211 112 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 UBE2G2P60604 165 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 HIST3H3Q16695 136 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 C1orf140Q5VVS0 124 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 IZUMO2Q6UXV1 221 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TCTEX1D1Q8N7M0 179 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 GNPDA2Q8TDQ7 276 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM141Q96I45 108 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 C8orf76Q96K31 380 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 MAP1LC3BQ9GZQ8 125 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 IMP3Q9NV31 184 aaKnown RBP-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 UQCC1Q9NVA1 299 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM242Q9NWH2 141 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 DNAJC13O75165 2243 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 NISCHQ9Y2I1 1504 aa-0.71□□□□□ -2.52
SNORD28-201ENST00000384706 C9orf84Q5VXU9 1444 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 NCAPD3P42695 1498 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ITPR3Q14573 2671 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 TRAV12-2A0A075B6T6 113 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 TRAV4A0A0B4J268 109 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ERICH2A1L162 156 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ARL5CA6NH57 179 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 IQCF5A8MTL0 148 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ZNF670-ZNF695F2Z2N8 137 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 M0R036 132 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 YKT6O15498 198 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 HIST1H2BKO60814 126 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ATP5HO75947 161 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 LYPLA2O95372 231 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 CALB1P05937 261 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 HIST1H2BJP06899 126 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 CXCL1P09341 107 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 SPINK8P0C7L1 97 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 NFYBP25208 207 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 ERP29P30040 261 aaKnown RBP-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 GCHFRP30047 84 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 CAPZBP47756 277 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 TMBIM6P55061 237 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 MYL6P60660 151 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 EMX2Q04743 252 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms