RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 FUT9Q9Y231 359 aa12.28□□□□□ -0.44
RPUSD3-201ENST00000383820 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
RPUSD3-201ENST00000383820 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 A6NHS1 94 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 CCSO14618 274 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 PDE6HQ13956 83 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 SEC22CQ9BRL7 303 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
RPUSD3-201ENST00000383820 M0R3E3 92 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 SPINK4O60575 86 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 CST7O76096 145 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 NMBP08949 121 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 H2AFB2P0C5Z0 115 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 HIST1H1EP10412 219 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 CRISP2P16562 243 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 PVALBP20472 110 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 TCL1AP56279 114 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 ERCC8Q13216 396 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 PTTG2Q9NZH5 202 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
RPUSD3-201ENST00000383820 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 EREGO14944 169 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 MPDU1O75352 247 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 NDUFB4O95168 129 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 S100A11P31949 105 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 CD300CQ08708 224 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 SLAQ13239 276 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 C9orf47Q6ZRZ4 202 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 ENKURQ8TC29 256 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 TIMM9Q9Y5J7 89 aa12.25□□□□□ -0.45
RPUSD3-201ENST00000383820 C5orf51A6NDU8 294 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 PAX4O43316 350 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 NXPH4O95158 308 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 SULT1A1P50225 295 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 HBG1P69891 147 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 HBG2P69892 147 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 BAXQ07812 192 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 LINC00299Q6ZSB3 139 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 AAMDCQ9H7C9 122 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 LYRM2Q9NU23 88 aaPredicted RBP12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 PRO0255Q9UI72 69 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 KLF12Q9Y4X4 402 aa12.24□□□□□ -0.45
RPUSD3-201ENST00000383820 UBE2L5PA0A1B0GUS4 154 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 EPM2AB3EWF7 344 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 GPX1P07203 203 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 RNASE4P34096 147 aaKnown RBP12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 ERVFC1-1P60608 527 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 NFE4Q86UQ8 179 aa12.23□□□□□ -0.45
RPUSD3-201ENST00000383820 UPK1BO75841 260 aa12.22□□□□□ -0.45
RPUSD3-201ENST00000383820 TMEM78Q5T7P6 136 aa12.22□□□□□ -0.45
RPUSD3-201ENST00000383820 STX12Q86Y82 276 aa12.22□□□□□ -0.45
RPUSD3-201ENST00000383820 TMEM252Q8N6L7 170 aa12.22□□□□□ -0.45
RPUSD3-201ENST00000383820 VGLL1Q99990 258 aa12.22□□□□□ -0.45
RPUSD3-201ENST00000383820 RGS13O14921 159 aa12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 PYYP10082 97 aa12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 ASAH1Q13510 395 aa12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 ZFAND2AQ8N6M9 145 aa12.21□□□□□ -0.45
RPUSD3-201ENST00000383820 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 IGSF23A1L1A6 192 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 K7EP13 123 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 FGF7P21781 194 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 CRYBA4P53673 196 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 S100A10P60903 97 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 IL15RAQ13261 267 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 BATF3Q9NR55 127 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 HHLA3Q9XRX5 114 aa12.2□□□□□ -0.46
RPUSD3-201ENST00000383820 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 FHL2Q14192 279 aa12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 ICAM4Q14773 271 aa12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 ARPC5LQ9BPX5 153 aa12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
RPUSD3-201ENST00000383820 IGKV2-40A0A087WW87 121 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 IGKV2D-40P01614 121 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 IGHV3-53P01767 116 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 RAB32Q13637 225 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 PRR9Q5T870 116 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 SLC25A2Q9BXI2 301 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 GPN1Q9HCN4 374 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-201ENST00000383820 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 XGP55808 180 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms