RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 CDK2AP2O75956 126 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 BPESC1Q9GZL8 116 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 TMEM14BQ9NUH8 114 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 J3QKU1 62 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 TAL2Q16559 108 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
SNPH-201ENST00000381867 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
SNPH-201ENST00000381867 LY6HO94772 140 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
SNPH-201ENST00000381867 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 RNF114Q9Y508 228 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 DENND4CQ5VZ89 1909 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
SNPH-201ENST00000381867 SS18Q15532 418 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 COL8A2P25067 703 aa11.22□□□□□ -0.61
SNPH-201ENST00000381867 LRRK1Q38SD2 2015 aa11.21□□□□□ -0.61
SNPH-201ENST00000381867 DKK1O94907 266 aa11.21□□□□□ -0.61
SNPH-201ENST00000381867 CEND1Q8N111 149 aa11.21□□□□□ -0.61
SNPH-201ENST00000381867 SPRY4Q9C004 299 aa11.21□□□□□ -0.61
SNPH-201ENST00000381867 FAM215AQ9Y5M1 114 aa11.21□□□□□ -0.62
SNPH-201ENST00000381867 OBSL1O75147 1896 aa11.21□□□□□ -0.62
SNPH-201ENST00000381867 TRBV19A0A075B6N1 114 aa11.21□□□□□ -0.62
SNPH-201ENST00000381867 FGF6P10767 208 aa11.21□□□□□ -0.62
SNPH-201ENST00000381867 E9PQ18 207 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 NDUFB8O95169 186 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
SNPH-201ENST00000381867 PLXNB3Q9ULL4 1909 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 SIVA1O15304 175 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
SNPH-201ENST00000381867 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
SNPH-201ENST00000381867 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 LMO1P25800 156 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 RHODO00212 210 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 AZU1P20160 251 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 RNF166Q96A37 237 aaPredicted RBP11.19□□□□□ -0.62
SNPH-201ENST00000381867 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
SNPH-201ENST00000381867 C1QTNF4Q9BXJ3 329 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 I3L3M4 83 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 UBL5Q9BZL1 73 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
SNPH-201ENST00000381867 MAPK1IP1LQ8NDC0 245 aa11.18□□□□□ -0.62
SNPH-201ENST00000381867 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
SNPH-201ENST00000381867 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
SNPH-201ENST00000381867 TRACP01848 142 aa11.18□□□□□ -0.62
SNPH-201ENST00000381867 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
SNPH-201ENST00000381867 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
SNPH-201ENST00000381867 PSCAO43653 123 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 COL6A6A6NMZ7 2263 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 IGKV1-39P01597 117 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 IGKV1D-39P04432 117 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 Q96MF0 132 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 TMEM14CQ9P0S9 112 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 H3BMG7 143 aa11.17□□□□□ -0.62
SNPH-201ENST00000381867 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
SNPH-201ENST00000381867 F8VRH5 84 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 J3QLI3 93 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 MSMBP08118 114 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 FAM110DQ8TAY7 271 aaPredicted RBP11.16□□□□□ -0.62
SNPH-201ENST00000381867 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 DOPEY2Q9Y3R5 2298 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
SNPH-201ENST00000381867 K7ERJ3 54 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 OVOL3O00110 214 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 SAA4P35542 130 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 TECTAO75443 2155 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 PRR25Q96S07 402 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
SNPH-201ENST00000381867 NPYP01303 97 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 CDKN1BP46527 198 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 IGLC7A0M8Q6 106 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
SNPH-201ENST00000381867 SMIM2Q9BVW6 85 aa11.15□□□□□ -0.63
SNPH-201ENST00000381867 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 Q71RC1 249 aaPredicted RBP11.14□□□□□ -0.63
SNPH-201ENST00000381867 HAPLN4Q86UW8 402 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 KIR2DL5BA0A0G2JN68 375 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 KIR2DL5BA0A0G2JPC4 375 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 H3BRN7 92 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 KIR2DL5AQ8N109 375 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
SNPH-201ENST00000381867 ZNF106Q9H2Y7 1883 aaKnown RBP11.14□□□□□ -0.63
SNPH-201ENST00000381867 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms