RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 ERCC8Q13216 396 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 ZNF266Q14584 549 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 KHDC3LQ587J8 217 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 OR2G3Q8NGZ4 309 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 C2CD4CQ8TF44 421 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 SH3BGRL3Q9H299 93 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 PPP1R14DQ9NXH3 145 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 PRELID1Q9Y255 219 aa8.22□□□□□ -1.09
APOBEC3F-202ENST00000381565 DNAH2Q9P225 4427 aa8.21□□□□□ -1.09
APOBEC3F-202ENST00000381565 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 SMLR1H3BR10 107 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 TSPOP30536 169 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 FAM122CQ6P4D5 195 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 TMEM256Q8N2U0 113 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 PSMG3Q9BT73 122 aaPredicted RBP8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 APLNQ9ULZ1 77 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 NACAE9PAV3 2078 aa8.21□□□□□ -1.1
APOBEC3F-202ENST00000381565 ABCA13Q86UQ4 5058 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 J3KRW8 73 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 TAS2R45P59539 299 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 PRR9Q5T870 116 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 RPL7L1Q6DKI1 246 aaKnown RBP8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 VGLL1Q99990 258 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 C20orf144Q9BQM9 153 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 AGPAT4-IT1Q9H0P7 198 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 Q9H3A6 140 aa8.2□□□□□ -1.1
APOBEC3F-202ENST00000381565 DYNC1H1Q14204 4646 aaKnown RBP8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 IGHV4-4A0A075B6R2 117 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 DEFB131BA0A096LNP1 70 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 TEX48A0A1B0GUV7 120 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 KLLNB2CW77 178 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 IGLL5B9A064 214 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 HMGB3O15347 200 aaKnown RBP8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 ARL14EPLP0DKL9 152 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 LEPP41159 167 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 TAS2R60P59551 318 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 RANP62826 216 aaKnown RBP8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 SSX7Q7RTT5 188 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 OR10G4Q8NGN3 311 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 LINC01587Q99440 93 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
APOBEC3F-202ENST00000381565 TRAV12-3A0A0B4J271 114 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 H7BYZ3 331 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 ARPC5O15511 151 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 CRISP2P16562 243 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 CDC34P49427 236 aaPredicted RBP8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 TCTAP57738 103 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 CD300CQ08708 224 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 BTN1A1Q13410 526 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 LGALS9CQ6DKI2 356 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 PQLC2Q6ZP29 291 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 LYPD1Q8N2G4 141 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 Q8TAT8 98 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 LINC00477Q96M19 166 aa8.18□□□□□ -1.1
APOBEC3F-202ENST00000381565 A0A1W2PPV4 95 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 C7orf71A4D174 169 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 SLC25A5P05141 298 aaKnown RBP8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 HTN1P15515 57 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 SERF2P84101 59 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 Q6ZQT7 251 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 OR11H4Q8NGC9 324 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 CYTL1Q9NRR1 136 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
APOBEC3F-202ENST00000381565 DNAH11Q96DT5 4516 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 RBAKDNA6NC62 111 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 DIRC3C9JPN6 131 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZNF324O75467 553 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 DAD1P61803 113 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 TMEM78Q5T7P6 136 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 MUC4Q99102 2169 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
APOBEC3F-202ENST00000381565 BORCS7-ASMTA0A0B4J1R7 106 aa8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZNF138P52744 262 aa8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 ZNF493Q6ZR52 646 aa8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 HYLS1Q96M11 299 aa8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 PYGO2Q9BRQ0 406 aa8.15□□□□□ -1.1
APOBEC3F-202ENST00000381565 TRBV7-9A0A0J9YWB2 115 aa8.14□□□□□ -1.11
APOBEC3F-202ENST00000381565 PGPA6NDG6 321 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms