RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 ATP5L2Q7Z4Y8 100 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 RCHY1Q96PM5 261 aa9.81□□□□□ -0.84
CDX2-201ENST00000381020 D6R8Y8 96 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 H3BVH4 76 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 Q6AWC8 147 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 BCL6BQ8N143 479 aaPredicted RBP9.8□□□□□ -0.84
CDX2-201ENST00000381020 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 CFHR4Q92496 578 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 RHPN1-AS1Q9BWJ2 59 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 PDE6HQ13956 83 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 LINC01356Q8N9X3 169 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
CDX2-201ENST00000381020 SMIM27A0A1W2PRY6 76 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
CDX2-201ENST00000381020 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
CDX2-201ENST00000381020 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
CDX2-201ENST00000381020 DSCR9P59020 149 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 MRPL27Q9P0M9 148 aaKnown RBP9.79□□□□□ -0.84
CDX2-201ENST00000381020 KLF2Q9Y5W3 355 aaPredicted RBP9.79□□□□□ -0.84
CDX2-201ENST00000381020 NDUFA3O95167 84 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 C10orf105Q8TEF2 133 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 UQCR10Q9UDW1 63 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 NDUFAF3Q9BU61 184 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 PRDM13Q9H4Q3 707 aa9.79□□□□□ -0.84
CDX2-201ENST00000381020 Q5PR19 223 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 FAM231DQ6ZW35 169 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 MYOZ3Q8TDC0 251 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 ZZEF1O43149 2961 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 SLC25A16P16260 332 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 PSMG4Q5JS54 123 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 PRR25Q96S07 402 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 Q6ZWC4 215 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 IGF2BP2-AS1Q96M15 143 aa9.78□□□□□ -0.84
CDX2-201ENST00000381020 LY6LH3BQJ8 138 aa9.77□□□□□ -0.84
CDX2-201ENST00000381020 CRYGBP07316 175 aa9.77□□□□□ -0.84
CDX2-201ENST00000381020 RAI1Q7Z5J4 1906 aaPredicted RBP9.77□□□□□ -0.84
CDX2-201ENST00000381020 DCHS1Q96JQ0 3298 aa9.77□□□□□ -0.84
CDX2-201ENST00000381020 ODF3BA8MYP8 253 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 NUDT3O95989 172 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 YAE1D1Q9NRH1 226 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 LTAP01374 205 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 ASIPP42127 132 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 Q0VG73 95 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 Q96MF0 132 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 YPEL4Q96NS1 127 aa9.77□□□□□ -0.85
CDX2-201ENST00000381020 A8MWP6 167 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 TCF21O43680 179 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 PLP1P60201 277 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 CD7P09564 240 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
CDX2-201ENST00000381020 FAM223AQ8IWN6 122 aa9.76□□□□□ -0.85
CDX2-201ENST00000381020 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 SPRY2O43597 315 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
CDX2-201ENST00000381020 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
CDX2-201ENST00000381020 C7orf71A4D174 169 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
CDX2-201ENST00000381020 F6UB75 175 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 IGLV2-8P01709 118 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 GOLT1BQ9Y3E0 138 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 A0A1B0GW15 77 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 DEFB1P60022 68 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
CDX2-201ENST00000381020 C9orf139Q6ZV77 190 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 DAZ1Q9NQZ3 744 aaKnown RBP9.74□□□□□ -0.85
CDX2-201ENST00000381020 POLR3KQ9Y2Y1 108 aaPredicted RBP9.74□□□□□ -0.85
CDX2-201ENST00000381020 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
CDX2-201ENST00000381020 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 SMIM12Q96EX1 92 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 COL12A1Q99715 3063 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 ZNF56Q15929 161 aa9.74□□□□□ -0.85
CDX2-201ENST00000381020 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 PRAC2D3DTV9 90 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 LEPP41159 167 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 KALRNO60229 2985 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 C1orf194Q5T5A4 169 aa9.73□□□□□ -0.85
CDX2-201ENST00000381020 EREGO14944 169 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
CDX2-201ENST00000381020 PAX1P15863 534 aa9.72□□□□□ -0.85
CDX2-201ENST00000381020 CT83Q5H943 113 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms