RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 C15orf61A6NNL5 157 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 ERCC8Q13216 396 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 TMEM200BQ69YZ2 307 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 B4DSR2 109 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 TIMM17BO60830 172 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 ELANEP08246 267 aa8.71□□□□□ -1.02
CLCN4-202ENST00000380833 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
CLCN4-202ENST00000380833 CFHR2P36980 270 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 EFNA4P52798 201 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 DEFB131AP59861 70 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 TRIOBPQ9H2D6 2365 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 F8VRH5 84 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 PVRIGQ6DKI7 326 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 H0YJW9 148 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 DKK1O94907 266 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 PFN2P35080 140 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 DKK2Q9UBU2 259 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 DOCK10Q96BY6 2186 aa8.7□□□□□ -1.02
CLCN4-202ENST00000380833 IGKV1D-13A0A0B4J2D9 117 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 H3BT86 120 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 IGKV1-13P0DP09 117 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 FXYD2P54710 66 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 TMEM14EPQ6UXP3 125 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 ORMDL1Q9P0S3 153 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 A0A0J9YY99 117 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 WIPF3A6NGB9 483 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 J3QKU1 62 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 MP68P56378 58 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 LYPD2Q6UXB3 125 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 ZNF493Q6ZR52 646 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 J3QRE1 110 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 NDUFS7O75251 213 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 NXPH4O95158 308 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 PAQR4Q8N4S7 273 aaPredicted RBP8.69□□□□□ -1.02
CLCN4-202ENST00000380833 LINC01356Q8N9X3 169 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 PSPNO60542 156 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 ZNF561-AS1K7EIQ3 104 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 RNF114Q9Y508 228 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 ARMS2P0C7Q2 107 aa8.69□□□□□ -1.02
CLCN4-202ENST00000380833 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 NDUFB8O95169 186 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 MDS2Q8NDY4 140 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
CLCN4-202ENST00000380833 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
CLCN4-202ENST00000380833 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 OVOL3O00110 214 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
CLCN4-202ENST00000380833 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 DEFB105AQ8NG35 78 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 IGFBPL1Q8WX77 278 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 SEC16AO15027 2179 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
CLCN4-202ENST00000380833 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
CLCN4-202ENST00000380833 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 LYPD3O95274 346 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
CLCN4-202ENST00000380833 FOCADQ5VW36 1801 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 CADP27708 2225 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 PYGO2Q9BRQ0 406 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
CLCN4-202ENST00000380833 IGHV4-4A0A075B6R2 117 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 KIAA1551Q9HCM1 1747 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 J3QQQ9 107 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 WIPF2Q8TF74 440 aaPredicted RBP8.67□□□□□ -1.02
CLCN4-202ENST00000380833 SAA4P35542 130 aa8.67□□□□□ -1.02
CLCN4-202ENST00000380833 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 SPINK13Q1W4C9 94 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 NRGNQ92686 78 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 IGHV1-3A0A0C4DH29 117 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 SMIM10L1P0DMW3 83 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 SMIM10Q96HG1 83 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 THADAQ6YHU6 1953 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 NUPR1O60356 82 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 Q86TA4 180 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 TP53TG1Q9Y2A0 90 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 COL6A6A6NMZ7 2263 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 ARFGEF3Q5TH69 2177 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 VWCEQ96DN2 955 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 TNRC6AQ8NDV7 1962 aaKnown RBP8.66□□□□□ -1.02
CLCN4-202ENST00000380833 CACNA1IQ9P0X4 2223 aa8.66□□□□□ -1.02
CLCN4-202ENST00000380833 A0A0A6YYD4 124 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms