RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 FNDC1Q4ZHG4 1894 aaPredicted RBP12.83□□□□□ -0.36
COL2A1-202ENST00000380518 TRAV8-3A0A0A6YYJ7 113 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 SSBP2P81877 361 aaPredicted RBP12.83□□□□□ -0.36
COL2A1-202ENST00000380518 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 C8orf86Q6ZUL3 223 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 COX11Q9Y6N1 276 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 H3BRN7 92 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 EREGO14944 169 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 IGLV3-1P01715 115 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 NDUFA4O00483 81 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 HIST1H4AP62805 103 aaKnown RBP12.82□□□□□ -0.36
COL2A1-202ENST00000380518 C11orf52Q96A22 123 aa12.82□□□□□ -0.36
COL2A1-202ENST00000380518 ZNF134P52741 427 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 COL4A6Q14031 1691 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 MRPL51Q4U2R6 128 aaKnown RBP12.81□□□□□ -0.36
COL2A1-202ENST00000380518 HAPLN4Q86UW8 402 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
COL2A1-202ENST00000380518 PMVKQ15126 192 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 POU2AF1Q16633 256 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 DOCK11Q5JSL3 2073 aa12.81□□□□□ -0.36
COL2A1-202ENST00000380518 IGHV1OR15-1A0A075B7D0 117 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 C9JAW5 83 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 LINC01619G3V211 115 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 SLAQ13239 276 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 SSC4DQ8WTU2 575 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 MALRD1Q5VYJ5 2156 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 MMP23AO75900 390 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 TPSG1Q9NRR2 321 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 PRSS57Q6UWY2 283 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 I3L3M4 83 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 IGLC1P0CG04 106 aa12.8□□□□□ -0.36
COL2A1-202ENST00000380518 SP5Q6BEB4 398 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-202ENST00000380518 ADAMTSL5Q6ZMM2 481 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 IGLC3P0DOY3 106 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 KAAG1Q9UBP8 84 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 FAM215AQ9Y5M1 114 aa12.79□□□□□ -0.36
COL2A1-202ENST00000380518 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 KLK9Q9UKQ9 250 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 GAGE12JA6NER3 117 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 GAGE1Q13065 139 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 GAGE4Q13068 117 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 GAGE5Q13069 117 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 ZNF625Q96I27 306 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-202ENST00000380518 F8WEM9 126 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 K7EM74 188 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 IL15RAQ13261 267 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 CDKN1BP46527 198 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
COL2A1-202ENST00000380518 Q6ZWC4 215 aa12.77□□□□□ -0.36
COL2A1-202ENST00000380518 Q8NFD4 153 aa12.77□□□□□ -0.36
COL2A1-202ENST00000380518 KLF12Q9Y4X4 402 aa12.77□□□□□ -0.36
COL2A1-202ENST00000380518 PRR20EP86478 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 PRR20CP86479 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 PRR20DP86480 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 PRR20BP86481 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 PRR20AP86496 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 FXYD5Q96DB9 178 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 LGALS9BQ3B8N2 356 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 LGALS9CQ6DKI2 356 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 TRBV25-1A0A075B6N4 114 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
COL2A1-202ENST00000380518 PSCAO43653 123 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 DOCK9Q9BZ29 2069 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 IGHV1-24A0A0C4DH33 117 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 IGHV2-5P01817 119 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 SNHG12Q9BXW3 62 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
COL2A1-202ENST00000380518 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 ZC2HC1AQ96GY0 325 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 SMIM2Q9BVW6 85 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
COL2A1-202ENST00000380518 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
COL2A1-202ENST00000380518 J3QLI3 93 aa12.74□□□□□ -0.37
COL2A1-202ENST00000380518 GAGE2AQ6NT46 116 aa12.74□□□□□ -0.37
COL2A1-202ENST00000380518 GTF3C1Q12789 2109 aa12.74□□□□□ -0.37
COL2A1-202ENST00000380518 AZU1P20160 251 aa12.74□□□□□ -0.37
COL2A1-202ENST00000380518 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-202ENST00000380518 COX8AP10176 69 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 TRAV26-2A0A0B4J265 109 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 IGLL1P15814 213 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 NPYP01303 97 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms