RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SMIM20Q8N5G0 67 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 TMEM258P61165 79 aa13.66□□□□□ -0.22
COL4A3BP-203ENST00000380494 CDK2AP2O75956 126 aa13.65□□□□□ -0.22
COL4A3BP-203ENST00000380494 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
COL4A3BP-203ENST00000380494 TEX48A0A1B0GUV7 120 aa13.65□□□□□ -0.22
COL4A3BP-203ENST00000380494 INS-IGF2F8WCM5 200 aa13.65□□□□□ -0.22
COL4A3BP-203ENST00000380494 LYPD2Q6UXB3 125 aa13.64□□□□□ -0.23
COL4A3BP-203ENST00000380494 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
COL4A3BP-203ENST00000380494 ZNF493Q6ZR52 646 aa13.64□□□□□ -0.23
COL4A3BP-203ENST00000380494 Q6ZVH6 145 aa13.64□□□□□ -0.23
COL4A3BP-203ENST00000380494 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
COL4A3BP-203ENST00000380494 C8orf86Q6ZUL3 223 aa13.63□□□□□ -0.23
COL4A3BP-203ENST00000380494 HERVK_113P63121 156 aa13.63□□□□□ -0.23
COL4A3BP-203ENST00000380494 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
COL4A3BP-203ENST00000380494 DKK1O94907 266 aa13.63□□□□□ -0.23
COL4A3BP-203ENST00000380494 Q8NFD4 153 aa13.63□□□□□ -0.23
COL4A3BP-203ENST00000380494 BRWD1Q9NSI6 2320 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 RBAKDNA6NC62 111 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 WDR86Q86TI4 376 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 PCP2Q8IVA1 136 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 RHOHQ15669 191 aa13.62□□□□□ -0.23
COL4A3BP-203ENST00000380494 ANXA2RQ3ZCQ2 193 aa13.61□□□□□ -0.23
COL4A3BP-203ENST00000380494 MRAPQ8TCY5 172 aa13.61□□□□□ -0.23
COL4A3BP-203ENST00000380494 IGHV3-53P01767 116 aa13.61□□□□□ -0.23
COL4A3BP-203ENST00000380494 TRBV25-1A0A075B6N4 114 aa13.61□□□□□ -0.23
COL4A3BP-203ENST00000380494 G3V4G9 280 aa13.61□□□□□ -0.23
COL4A3BP-203ENST00000380494 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 NUPR1O60356 82 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 ATP6V0E2Q8NHE4 81 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 MRPL53Q96EL3 112 aaKnown RBP13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 TEX36Q5VZQ5 186 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 PTPRDP23468 1912 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 TP53BP1Q12888 1972 aaPredicted RBP13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 RALGAPA1Q6GYQ0 2036 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 DSCR8Q96T75 97 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 KNTC1P50748 2209 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 IGHV1-69DA0A0B4J2H0 117 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 CRYBA4P53673 196 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
COL4A3BP-203ENST00000380494 SAP30O75446 220 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 FAM120AOSQ5T036 256 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 NDUFA4O00483 81 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 IGF2BP2-AS1Q96M15 143 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 H3BUX3 64 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 PLA2G2EQ9NZK7 142 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 C8orf31Q8N9H6 132 aa13.59□□□□□ -0.23
COL4A3BP-203ENST00000380494 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.23
COL4A3BP-203ENST00000380494 MYLKQ15746 1914 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 TEN1Q86WV5 123 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 MSRB2Q9Y3D2 182 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 OVOL3O00110 214 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 HAMPP81172 84 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 RSPO1Q2MKA7 263 aaPredicted RBP13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 TRPM7Q96QT4 1865 aa13.58□□□□□ -0.24
COL4A3BP-203ENST00000380494 CRLF1O75462 422 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 ZNF134P52741 427 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 PRDM6Q9NQX0 595 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 A0A0G2JNJ9 132 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 J3KT08 172 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 Q9UFV3 132 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 MPDZO75970 2070 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 TRAV26-1A0A087WT03 109 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 PLXNA4Q9HCM2 1894 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 UBE2E1P51965 193 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
COL4A3BP-203ENST00000380494 ATOX1O00244 68 aa13.56□□□□□ -0.24
COL4A3BP-203ENST00000380494 SEC16AO15027 2179 aa13.56□□□□□ -0.24
COL4A3BP-203ENST00000380494 Q6ZR03 302 aa13.56□□□□□ -0.24
COL4A3BP-203ENST00000380494 COL8A2P25067 703 aa13.56□□□□□ -0.24
COL4A3BP-203ENST00000380494 TMEM243Q9BU79 118 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 LENEPQ9Y5L5 61 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 B4DSR2 109 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 SAA4P35542 130 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 BAALC-AS2P0C853 105 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 CD59P13987 128 aa13.55□□□□□ -0.24
COL4A3BP-203ENST00000380494 FOXI1Q12951 378 aa13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 RNF166Q96A37 237 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 HERV-K104P63124 156 aa13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
COL4A3BP-203ENST00000380494 Q6ZSR3 168 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 ORMDL1Q9P0S3 153 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 EGR2P11161 476 aaPredicted RBP13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 PFN2P35080 140 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 SSC4DQ8WTU2 575 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 KLK9Q9UKQ9 250 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 RP1P56715 2156 aa13.53□□□□□ -0.24
COL4A3BP-203ENST00000380494 DEFB131AP59861 70 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms