RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 FOXA3P55318 350 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 KRTDAPP60985 99 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 PDE6HQ13956 83 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 CLEC19AQ6UXS0 136 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 Q8N976 141 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 C10orf105Q8TEF2 133 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 NRGNQ92686 78 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 URB1-AS1Q96HZ7 61 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 GFRA4Q9GZZ7 299 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 AAMDCQ9H7C9 122 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 ZFP30Q9Y2G7 519 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 USP24Q9UPU5 2620 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV4-30-2A0A087WSY4 118 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 NTF3P20783 257 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 SNHG12Q9BXW3 62 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV3OR16-13A0A075B7E8 117 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV3-74A0A0B4J1X5 117 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV1-69DA0A0B4J2H0 117 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 K7EQM0 130 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 M0QZ24 198 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV1-69P01742 117 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 RPL7P18124 248 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 C1orf194Q5T5A4 169 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 CLPSL1A2RUU4 121 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 SAP30O75446 220 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 ARMS2P0C7Q2 107 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 ATP5J2P56134 94 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 KLF5Q13887 457 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 KLK9Q2XQG4 91 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 Q8TAT8 98 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 VGLL1Q99990 258 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 KLK9Q9UKQ9 250 aa6.16□□□□□ -1.42
PDLIM5-204ENST00000380176 FBN2P35556 2912 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV3-49A0A0A0MS15 119 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 FAM231BA6NCW3 169 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 CHEK1O14757 476 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 PRB1P04280 392 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 VPS25Q9BRG1 176 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 CENPEQ02224 2701 aa6.15□□□□□ -1.42
PDLIM5-204ENST00000380176 TMSB15BA0A087X1C1 80 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 KIR2DL5BA0A0G2JN68 375 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 KIR2DL5BA0A0G2JPC4 375 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF207O43670 478 aaKnown RBP6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 BUB3O43684 328 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 C3orf79P0CE67 100 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 PSG9Q00887 426 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 LY6EQ16553 131 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 KIR2DL5AQ8N109 375 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.43
PDLIM5-204ENST00000380176 CSN1S1P47710 185 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 PMCHL1Q16048 86 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 RNF182Q8N6D2 247 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 POLQO75417 2590 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 ZANQ9Y493 2812 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 A0A087WWL8 130 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 PRAC2D3DTV9 90 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 C19orf54Q5BKX5 351 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 PRR25Q96S07 402 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 MDFIQ99750 246 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 MOB4Q9Y3A3 225 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF462Q96JM2 2506 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 LOC102724200A0A096LPH7 203 aaPredicted RBP6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 TRAV41A0A0B4J266 112 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 WIPF1O43516 503 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 SH2D1AO60880 128 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 HSBP1O75506 76 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 AVPP01185 164 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 LCN12Q6JVE5 192 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 Q6ZS46 218 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 MEGF9Q9H1U4 602 aa6.14□□□□□ -1.43
PDLIM5-204ENST00000380176 FAM208BQ5VWN6 2430 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 MUC21A0A0G2JKD1 596 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 MUC21A0A140T8X8 626 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 ANKRD17O75179 2603 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF138P52744 262 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 ERCC8Q13216 396 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 MUC21Q5SSG8 566 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 EBLN2Q6P2I7 272 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 EEF1AKMT3Q96AZ1 226 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 TMEM8BA6NDV4 472 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 M0R2Z0 102 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 CT45A10P0DMU9 189 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 USP9YO00507 2555 aaPredicted RBP6.13□□□□□ -1.43
PDLIM5-204ENST00000380176 TRBV7-1A0A0A6YYK4 115 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 TRBV12-3P01733 135 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms