RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SLURP1P55000 103 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 FOXE3Q13461 319 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TMEM183BQ1AE95 376 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TMEM136Q6ZRR5 245 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 DTX2Q86UW9 622 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TMEM183AQ8IXX5 376 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 RPP21Q9H633 154 aaKnown RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 LOC102724200A0A096LPH7 203 aaPredicted RBP6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 HSBP1L1C9JCN9 74 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 CFHR3Q02985 330 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 C11orf71Q6IPW1 123 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 SIGLEC15Q6ZMC9 328 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 SMDT1Q9H4I9 107 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 TP73-AS1Q9UF72 201 aa6.32□□□□□ -1.4
CKAP2-203ENST00000378037 I3L2K1 104 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 AMBPP02760 352 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 TMEM30BQ3MIR4 351 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 FBXL19-AS1Q494R0 122 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 ZC2HC1AQ96GY0 325 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 FAM167A-AS1Q96KT0 104 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 TRGV9Q99603 122 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 TCEAL7Q9BRU2 100 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
CKAP2-203ENST00000378037 NMUP48645 174 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 LINC00311Q8N616 119 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 OR11H1Q8NG94 326 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 SIRPDQ9H106 197 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 CDC42EP3Q9UKI2 254 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 S100A8P05109 93 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 APRG1Q8IVJ8 170 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 OR11H6Q8NGC7 330 aa6.31□□□□□ -1.4
CKAP2-203ENST00000378037 HTN3P15516 51 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 MINOS1Q5TGZ0 78 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 XCL2Q9UBD3 114 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 MINOS1-NBL1R4GNA1 71 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 TRAV30A0A087WSZ9 112 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 IGHV3-16A0A0C4DH30 117 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 CD99P14209 185 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 PAX1P15863 534 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 HBBP68871 147 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 FOXL1Q12952 345 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 C14orf178Q8N769 122 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-203ENST00000378037 CFHR4Q92496 578 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 PRSS22Q9GZN4 317 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 A0A1B0GUT8 65 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 SH2D1AO60880 128 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 PF4P02776 101 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 ZNF56Q15929 161 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 POU2AF1Q16633 256 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 Q6ZN92 141 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 AJUBAQ96IF1 538 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 TXNDC17Q9BRA2 123 aa6.3□□□□□ -1.4
CKAP2-203ENST00000378037 TRBV19A0A075B6N1 114 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 D6R8Y8 96 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 ITGB1BP1O14713 200 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 SAP30O75446 220 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-203ENST00000378037 RAB9AP51151 201 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 DEFB131AP59861 70 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 NAA38Q9BRA0 125 aaKnown RBP6.29□□□□□ -1.4
CKAP2-203ENST00000378037 OR4C46A6NHA9 309 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 RIGQ13278 110 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 HIST3H2BBQ8N257 126 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 KLHDC1Q8N7A1 406 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 FER1L6-AS1Q8NA97 138 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 OTORQ9NRC9 128 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 IGHV3-64A0A075B6Q5 118 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 HOXA5P20719 270 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 DEFB113Q30KQ7 82 aa6.29□□□□□ -1.4
CKAP2-203ENST00000378037 FAM159AQ6UWV7 190 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 Q86TA4 180 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 V9GYV3 84 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 C7orf71A4D174 169 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 FBLL1A6NHQ2 334 aaKnown RBP6.28□□□□□ -1.4
CKAP2-203ENST00000378037 GNRH2O43555 120 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 C5orf56Q8N8D9 126 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
CKAP2-203ENST00000378037 IGLV11-55A0A075B6I3 123 aa6.27□□□□□ -1.4
CKAP2-203ENST00000378037 CBY3A6NI87 242 aa6.27□□□□□ -1.4
CKAP2-203ENST00000378037 TOMM40O96008 361 aa6.27□□□□□ -1.4
CKAP2-203ENST00000378037 WDR73Q6P4I2 378 aa6.27□□□□□ -1.4
CKAP2-203ENST00000378037 ESM1Q9NQ30 184 aa6.27□□□□□ -1.4
CKAP2-203ENST00000378037 PDZD2O15018 2839 aa6.27□□□□□ -1.41
CKAP2-203ENST00000378037 HLA-DQA1P01909 254 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms