RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LSM4Q9Y4Z0 139 aaKnown RBP15.59■□□□□ 0.09
PCDH8-202ENST00000377942 IGHV1OR15-1A0A075B7D0 117 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 GGTLC3B5MD39 225 aa15.59■□□□□ 0.09
PCDH8-202ENST00000377942 CUL9Q8IWT3 2517 aa15.58■□□□□ 0.09
PCDH8-202ENST00000377942 CDKN1BP46527 198 aa15.58■□□□□ 0.09
PCDH8-202ENST00000377942 CD300EQ496F6 205 aaPredicted RBP15.58■□□□□ 0.08
PCDH8-202ENST00000377942 MED13Q9UHV7 2174 aa15.58■□□□□ 0.08
PCDH8-202ENST00000377942 COL4A3Q01955 1670 aa15.58■□□□□ 0.08
PCDH8-202ENST00000377942 LOC102724200A0A096LPH7 203 aaPredicted RBP15.58■□□□□ 0.08
PCDH8-202ENST00000377942 C5orf30Q96GV9 206 aa15.58■□□□□ 0.08
PCDH8-202ENST00000377942 ZNF106Q9H2Y7 1883 aaKnown RBP15.57■□□□□ 0.08
PCDH8-202ENST00000377942 ADCYAP1P18509 176 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 OTOGLQ3ZCN5 2332 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 C11orf52Q96A22 123 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 NDUFAF3Q9BU61 184 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 TSSC4Q9Y5U2 329 aaPredicted RBP15.57■□□□□ 0.08
PCDH8-202ENST00000377942 A0A087WWL8 130 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 NDUFS6O75380 124 aaKnown RBP15.57■□□□□ 0.08
PCDH8-202ENST00000377942 RASL10AQ92737 203 aa15.57■□□□□ 0.08
PCDH8-202ENST00000377942 A8MWV9 139 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 DEFB130BP0DP73 79 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 DEFB130AP0DP74 79 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 C21orf62-AS1Q17RA5 79 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 ZNF114Q8NC26 417 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 ATP6V0BQ99437 205 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 PRORYQ9H606 182 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 APOC4P55056 127 aa15.56■□□□□ 0.08
PCDH8-202ENST00000377942 FNDC4Q9H6D8 234 aaPredicted RBP15.56■□□□□ 0.08
PCDH8-202ENST00000377942 LGALS1P09382 135 aaKnown RBP15.55■□□□□ 0.08
PCDH8-202ENST00000377942 VWC2Q2TAL6 325 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 FXYD5Q96DB9 178 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 ANKHD1Q8IWZ3 2542 aaKnown RBP15.55■□□□□ 0.08
PCDH8-202ENST00000377942 COL4A4P53420 1690 aaPredicted RBP15.55■□□□□ 0.08
PCDH8-202ENST00000377942 TMEM158Q8WZ71 300 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 FOXE3Q13461 319 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 C8orf49Q96NF6 230 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 C9JQL5 133 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 CKS1BP61024 79 aa15.55■□□□□ 0.08
PCDH8-202ENST00000377942 TMEM238C9JI98 176 aa15.54■□□□□ 0.08
PCDH8-202ENST00000377942 TNFRSF6BO95407 300 aa15.54■□□□□ 0.08
PCDH8-202ENST00000377942 SLC25A20O43772 301 aa15.54■□□□□ 0.08
PCDH8-202ENST00000377942 PLA2G5P39877 138 aa15.54■□□□□ 0.08
PCDH8-202ENST00000377942 Q71RC1 249 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-202ENST00000377942 TMEM131Q92545 1883 aa15.54■□□□□ 0.08
PCDH8-202ENST00000377942 RIPPLY3P57055 190 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 FAM104BQ5XKR9 115 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 TMEM256Q8N2U0 113 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 MRPL53Q96EL3 112 aaKnown RBP15.53■□□□□ 0.08
PCDH8-202ENST00000377942 IGHV7-81A0A0B4J1V7 117 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 TRAV2A0A0B4J234 112 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 A0A1B0GUS0 222 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 GUSBP1Q15486 140 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 ARFGEF3Q5TH69 2177 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 IGHV4-38-2P0DP08 117 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 SCGB1A1P11684 91 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 HSD52Q0P140 79 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 C1orf159Q96HA4 380 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 DOCK11Q5JSL3 2073 aa15.53■□□□□ 0.08
PCDH8-202ENST00000377942 Q0VG73 95 aa15.52■□□□□ 0.08
PCDH8-202ENST00000377942 CYYR1Q96J86 154 aa15.52■□□□□ 0.08
PCDH8-202ENST00000377942 NHP2Q9NX24 153 aaKnown RBP15.52■□□□□ 0.08
PCDH8-202ENST00000377942 DAD1P61803 113 aa15.52■□□□□ 0.07
PCDH8-202ENST00000377942 SPCS1Q9Y6A9 102 aa15.52■□□□□ 0.07
PCDH8-202ENST00000377942 LINC00158P58513 81 aa15.51■□□□□ 0.07
PCDH8-202ENST00000377942 ORAOV1Q8WV07 137 aa15.51■□□□□ 0.07
PCDH8-202ENST00000377942 SMKR1H3BMG3 65 aa15.51■□□□□ 0.07
PCDH8-202ENST00000377942 LENEPQ9Y5L5 61 aa15.51■□□□□ 0.07
PCDH8-202ENST00000377942 LY6G5BQ8NDX9 201 aa15.51■□□□□ 0.07
PCDH8-202ENST00000377942 WISP2O76076 250 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 SPXQ9BT56 116 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 TMEM213A2RRL7 107 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 CACNA1AO00555 2505 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 SYS1-DBNDD2H3BUS1 97 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 HOXD3P31249 432 aaPredicted RBP15.5■□□□□ 0.07
PCDH8-202ENST00000377942 ANXA2RQ3ZCQ2 193 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 FOXI2Q6ZQN5 318 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 KLK9Q9UKQ9 250 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 IGLV1-47P01700 117 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 C3orf79P0CE67 100 aa15.5■□□□□ 0.07
PCDH8-202ENST00000377942 SPG11Q96JI7 2443 aa15.49■□□□□ 0.07
PCDH8-202ENST00000377942 SRSF2Q01130 221 aaKnown RBP15.49■□□□□ 0.07
PCDH8-202ENST00000377942 SS18Q15532 418 aa15.49■□□□□ 0.07
PCDH8-202ENST00000377942 A0A1B0GWB2 263 aa15.49■□□□□ 0.07
PCDH8-202ENST00000377942 PHLDA1Q8WV24 401 aaPredicted RBP15.49■□□□□ 0.07
PCDH8-202ENST00000377942 IGLV11-55A0A075B6I3 123 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 A8MWP6 167 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 CCL24O00175 119 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 AZU1P20160 251 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 PRR31Q5SQ13 230 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 V9GYV3 84 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.48■□□□□ 0.07
PCDH8-202ENST00000377942 TYMSP04818 313 aa15.48■□□□□ 0.07
PCDH8-202ENST00000377942 KNCNA6PVL3 124 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 IGFBPL1Q8WX77 278 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 PLCE1Q9P212 2302 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 IGHV3-64A0A075B6Q5 118 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 RBAKDNA6NC62 111 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 I3L2K1 104 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 MSMPQ1L6U9 139 aa15.47■□□□□ 0.07
PCDH8-202ENST00000377942 NOTCH2Q04721 2471 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms