RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DIAPH2-AS1Q14236 149 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 CCL19Q99731 98 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 SELENOKQ9Y6D0 94 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 G3V4G9 280 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 I3L2K1 104 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 COL8A2P25067 703 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 IGLV2-23P01705 113 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 ZNF493Q6ZR52 646 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 K7ERJ3 54 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 C2orf82Q6UX34 121 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
PCDH9-202ENST00000377865 IGHV3OR16-10A0A075B7F0 116 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 TRPT1Q86TN4 253 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 PRSS22Q9GZN4 317 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 MED12Q93074 2177 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 RBMY1A1P0DJD3 496 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 RBMY1CP0DJD4 496 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 PCP2Q8IVA1 136 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 URB1O60287 2271 aaKnown RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 IGHV3-11P01762 117 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 MORN3Q6PF18 240 aaPredicted RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 IGLL5B9A064 214 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 ZNF688P0C7X2 276 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
PCDH9-202ENST00000377865 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 LINC00574Q9H8X3 128 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 TP53TG1Q9Y2A0 90 aa6.93□□□□□ -1.3
PCDH9-202ENST00000377865 C9JAW5 83 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 IGFL2Q6UWQ7 119 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 IGFBPL1Q8WX77 278 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 PEMTQ9UBM1 199 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 C17orf77Q96MU5 243 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 WI2-2373I1.2A0A1W2PRP0 233 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 FOXI2Q6ZQN5 318 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 NPBQ8NG41 125 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 C1QTNF4Q9BXJ3 329 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 ASXL3Q9C0F0 2248 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 NCKAP5O14513 1909 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 H3BMG7 143 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 H3BMM0 161 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 CRYGCP07315 174 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 SPRNQ5BIV9 151 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
PCDH9-202ENST00000377865 PTPRSQ13332 1948 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 TRBV25-1A0A075B6N4 114 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 KIAA2026Q5HYC2 2103 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 EFNA4P52798 201 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 SAP30O75446 220 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 HLA-DMBP28068 263 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 NDPQ00604 133 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 GDF5OSQ5U4N7 250 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 FER1L5A0AVI2 2057 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 UBE2E1P51965 193 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 ZNF48Q96MX3 618 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-202ENST00000377865 LINC01587Q99440 93 aa6.91□□□□□ -1.3
PCDH9-202ENST00000377865 ATP5J2P56134 94 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 IGHV3-64A0A075B6Q5 118 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 PLA2G2CQ5R387 149 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 SDK2Q58EX2 2172 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 IGKV1D-37A0A075B6S9 117 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 RASL10AQ92737 203 aa6.9□□□□□ -1.3
PCDH9-202ENST00000377865 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 ZNF876PQ49A33 203 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 SP5Q6BEB4 398 aaPredicted RBP6.9□□□□□ -1.31
PCDH9-202ENST00000377865 K7EIM0 57 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 CGB3P0DN86 165 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 CGB7P0DN87 165 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 TMEM95Q3KNT9 176 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 LY6G5BQ8NDX9 201 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 CFHR4Q92496 578 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 SPRY4Q9C004 299 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 CTSZQ9UBR2 303 aa6.9□□□□□ -1.31
PCDH9-202ENST00000377865 NDUFA4O00483 81 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 RBX1P62877 108 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 MLST8Q9BVC4 326 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 ZNF415Q09FC8 603 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 DYNAPQ8N1N2 210 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 TEX22C9J3V5 150 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 I3L3M4 83 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms