RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 PTPRBP23467 1997 aa9.68□□□□□ -0.86
SF1-204ENST00000377390 NDUFB3O43676 98 aa9.68□□□□□ -0.86
SF1-204ENST00000377390 UFC1Q9Y3C8 167 aa9.68□□□□□ -0.86
SF1-204ENST00000377390 CCL21O00585 134 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 LEPP41159 167 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 PSMB2P49721 201 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 KLF17Q5JT82 389 aaPredicted RBP9.67□□□□□ -0.86
SF1-204ENST00000377390 TMEM133Q9H2Q1 129 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 J3KRW8 73 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
SF1-204ENST00000377390 Q8TAT8 98 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 RNF183Q96D59 192 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 SLC25A39Q9BZJ4 359 aaPredicted RBP9.67□□□□□ -0.86
SF1-204ENST00000377390 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
SF1-204ENST00000377390 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 PRR33A8MZF0 331 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 NPIPB6E9PJ23 425 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 C8orf46Q8TAG6 207 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 PTH2Q96A98 100 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 OTORQ9NRC9 128 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 HAX1O00165 279 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 APOBEC3AP31941 199 aaPredicted RBP9.66□□□□□ -0.86
SF1-204ENST00000377390 HIF1ANQ9NWT6 349 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 MRPL16Q9NX20 251 aaKnown RBP9.66□□□□□ -0.86
SF1-204ENST00000377390 ADAMTS20P59510 1910 aa9.66□□□□□ -0.86
SF1-204ENST00000377390 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 NDUFA3O95167 84 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 BOD1L2Q8IYS8 172 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 GAFA1Q96PS6 74 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 SPRY4Q9C004 299 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
SF1-204ENST00000377390 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
SF1-204ENST00000377390 MT-ATP8P03928 68 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 BSPH1Q075Z2 132 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 PCSK5Q92824 1860 aa9.65□□□□□ -0.86
SF1-204ENST00000377390 NPYP01303 97 aa9.65□□□□□ -0.87
SF1-204ENST00000377390 C3orf36Q3SXR2 165 aa9.65□□□□□ -0.87
SF1-204ENST00000377390 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.87
SF1-204ENST00000377390 TMEM75Q8N9X5 138 aa9.65□□□□□ -0.87
SF1-204ENST00000377390 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.87
SF1-204ENST00000377390 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 C19orf71A6NCJ1 209 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 H7C2G1 150 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 GLRXP35754 106 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 POU2AF1Q16633 256 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 IGHV1-46P01743 117 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
SF1-204ENST00000377390 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 TMEM167AQ8TBQ9 72 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 NGBQ9NPG2 151 aa9.64□□□□□ -0.87
SF1-204ENST00000377390 SPANXB1Q9NS25 103 aaPredicted RBP9.64□□□□□ -0.87
SF1-204ENST00000377390 MRPL51Q4U2R6 128 aaKnown RBP9.63□□□□□ -0.87
SF1-204ENST00000377390 TMEM200BQ69YZ2 307 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 C1orf122Q6ZSJ8 110 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 NDUFS7O75251 213 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
SF1-204ENST00000377390 CT83Q5H943 113 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 GFRA4Q9GZZ7 299 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 C7orf69Q9H7B7 122 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 RPEQ96AT9 228 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 FN1P02751 2386 aaKnown RBP9.63□□□□□ -0.87
SF1-204ENST00000377390 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
SF1-204ENST00000377390 TRAV40A0A0B4J280 105 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 F8W1H4 67 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 PRTN3P24158 256 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 C16orf97H3BN30 126 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 FGF6P10767 208 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 LINC00312Q9Y6C7 94 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 CGB3P0DN86 165 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 CGB7P0DN87 165 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 SCGB1A1P11684 91 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 GP9P14770 177 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 HERV-K104P63124 156 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 LGALS9BQ3B8N2 356 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 FAM104BQ5XKR9 115 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 LGALS9CQ6DKI2 356 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 FAM215AQ9Y5M1 114 aa9.62□□□□□ -0.87
SF1-204ENST00000377390 FOXI2Q6ZQN5 318 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 SEM1Q6ZVN7 128 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 DKK4Q9UBT3 224 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms