RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 RBPMS2Q6ZRY4 209 aaKnown RBP9.18□□□□□ -0.94
DDR1-227ENST00000376570 IGHV4-30-2A0A087WSY4 118 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 TEX22C9J3V5 150 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 H3BVH4 76 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 GATA1P15976 413 aaPredicted RBP9.18□□□□□ -0.94
DDR1-227ENST00000376570 COX19Q49B96 90 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 ZNF491Q8N8L2 437 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 C7orf71A4D174 169 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 ZNF688P0C7X2 276 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
DDR1-227ENST00000376570 OVOL3O00110 214 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 TRBV12-3P01733 135 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 LINC00614P0C842 121 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 POU2AF1Q16633 256 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 COX11Q9Y6N1 276 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 IGHV4-39P01824 125 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 COX6B1P14854 86 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
DDR1-227ENST00000376570 LINC00310P59036 64 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 Q0VG73 95 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
DDR1-227ENST00000376570 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 Q86TA4 180 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 WIPF2Q8TF74 440 aaPredicted RBP9.17□□□□□ -0.94
DDR1-227ENST00000376570 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 ITGB1BP1O14713 200 aa9.17□□□□□ -0.94
DDR1-227ENST00000376570 IGHV3-73A0A0B4J1V6 119 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 SH2D1AO60880 128 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 EMP1P54849 157 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
DDR1-227ENST00000376570 CR1LQ2VPA4 569 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 ZNF562Q6V9R5 426 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 KAAG1Q9UBP8 84 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 TRAV41A0A0B4J266 112 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 C12orf54Q6X4T0 127 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 NEGR1Q7Z3B1 354 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 AGRNO00468 2067 aa9.16□□□□□ -0.94
DDR1-227ENST00000376570 PTPRBP23467 1997 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 K7ERU9 68 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 GDF5OSQ5U4N7 250 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 Q6ZQT7 251 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 MEGF9Q9H1U4 602 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 FLNAP21333 2647 aaKnown RBP9.15□□□□□ -0.94
DDR1-227ENST00000376570 IGHV7-81A0A0B4J1V7 117 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 K7EMI3 77 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 C10orf99Q6UWK7 81 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 MTURNQ8N3F0 131 aa9.15□□□□□ -0.94
DDR1-227ENST00000376570 CHD6Q8TD26 2715 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 TRBV19A0A075B6N1 114 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 CACNG7P62955 275 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 GTSF1Q8WW33 167 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 DPF1Q92782 380 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 SHANK2-AS3Q9BTD1 123 aa9.15□□□□□ -0.95
DDR1-227ENST00000376570 TEP1Q99973 2627 aaKnown RBP9.15□□□□□ -0.95
DDR1-227ENST00000376570 I3L2K1 104 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 IGF2-ASQ6U949 168 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 JKAMPQ9P055 326 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
DDR1-227ENST00000376570 USP24Q9UPU5 2620 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 ITLN2Q8WWU7 325 aaPredicted RBP9.14□□□□□ -0.95
DDR1-227ENST00000376570 TMEM160Q9NX00 188 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 TRAV8-6A0A0B4J262 113 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 TMEM249Q2WGJ8 235 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 Q6ZS46 218 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
DDR1-227ENST00000376570 TRAV12-2A0A075B6T6 113 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 PAX8Q06710 450 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 PAX1P15863 534 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 TNFRSF14Q92956 283 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 ITPR3Q14573 2671 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 TRAV30A0A087WSZ9 112 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 GP9P14770 177 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 Q5PR19 223 aa9.13□□□□□ -0.95
DDR1-227ENST00000376570 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 IGHV2-70DA0A0C4DH43 119 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 IGHV4-59P01825 116 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
DDR1-227ENST00000376570 PVRIGQ6DKI7 326 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 PLP1P60201 277 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 FOXE3Q13461 319 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 PSG3Q16557 428 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms