RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ZNF418Q8TF45 676 aaPredicted RBP11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 TMEM158Q8WZ71 300 aa11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 RNASE4P34096 147 aaKnown RBP11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 SAMD5Q5TGI4 173 aa11.73□□□□□ -0.53
UBQLN1-202ENST00000376395 K7EMI3 77 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 NDUFB8O95169 186 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 LTAP01374 205 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 IGKV1-17P01599 117 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 PPBPP02775 128 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 C2orf70A6NJV1 201 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 GP9P14770 177 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 DGAT2L7PQ6IED9 249 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 TTTY13Q9BZ97 58 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 SIGLEC8Q9NYZ4 499 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 RAXQ9Y2V3 346 aa11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
UBQLN1-202ENST00000376395 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 A6NJY4 79 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 LYRM7Q5U5X0 104 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 VGLL1Q99990 258 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 OCIAD2Q56VL3 154 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
UBQLN1-202ENST00000376395 VWC2LB2RUY7 222 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 ASIPP42127 132 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 NPYP01303 97 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 IGLV2-23P01705 113 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 THBDP07204 575 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF56Q15929 161 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 BEX4Q9NWD9 120 aaPredicted RBP11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.54
UBQLN1-202ENST00000376395 HAX1O00165 279 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 ANKRD39Q53RE8 183 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
UBQLN1-202ENST00000376395 LOXL1Q08397 574 aaPredicted RBP11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 PCP2Q8IVA1 136 aa11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 SLC50A1Q9BRV3 221 aa11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 NEU4Q8WWR8 484 aaPredicted RBP11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF479Q96JC4 524 aa11.69□□□□□ -0.54
UBQLN1-202ENST00000376395 G3V318 75 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 TNFRSF6BO95407 300 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 CTRLP40313 264 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 IGFL2Q6UWQ7 119 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 PRR25Q96S07 402 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 COX8AP10176 69 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 ID1P41134 155 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 EMP1P54849 157 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 CYSLTR1Q9Y271 337 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 RNF5Q99942 180 aa11.68□□□□□ -0.54
UBQLN1-202ENST00000376395 NDUFS7O75251 213 aa11.67□□□□□ -0.54
UBQLN1-202ENST00000376395 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
UBQLN1-202ENST00000376395 BRD3OSQ6XYD6 125 aa11.67□□□□□ -0.54
UBQLN1-202ENST00000376395 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
UBQLN1-202ENST00000376395 H3BRN7 92 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 PAX1P15863 534 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 CCDC168Q8NDH2 2452 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 LAGE3Q14657 143 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 Q8N976 141 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 K7EIM0 57 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 K7ERJ3 54 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 DPF1Q92782 380 aa11.66□□□□□ -0.54
UBQLN1-202ENST00000376395 PAX8Q06710 450 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 PDE6HQ13956 83 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 MAP1AP78559 2803 aaPredicted RBP11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 SAP30O75446 220 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 USP9XQ93008 2570 aaPredicted RBP11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 COL4A2P08572 1712 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 LOC400499M0QZD8 3231 aa11.65□□□□□ -0.54
UBQLN1-202ENST00000376395 TMEM8BA6NDV4 472 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 1462.4 ms