RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 WNK1Q9H4A3 2382 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 WT1P19544 449 aaPredicted RBP5.2□□□□□ -1.58
SMC1A-202ENST00000375340 TANC2Q9HCD6 1990 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 LHBP01229 141 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 PLNP26678 52 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 FAM104BQ5XKR9 115 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 FCN3O75636 299 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 C1orf229Q6ZS94 237 aaPredicted RBP5.2□□□□□ -1.58
SMC1A-202ENST00000375340 FAM231DQ6ZW35 169 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 C9orf118A6NHY6 69 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 G3V318 75 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 H7C1H1 209 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 MOB4Q9Y3A3 225 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 PGPEP1Q9NXJ5 209 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 CTSZQ9UBR2 303 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 IGLC7A0M8Q6 106 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 E7EUB6 86 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 COX8AP10176 69 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 PRTN3P24158 256 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 PYGO2Q9BRQ0 406 aa5.2□□□□□ -1.58
SMC1A-202ENST00000375340 ZC2HC1BQ5TFG8 222 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 SAA4P35542 130 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 IGLV3-9A0A075B6K5 115 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 TRBV7-1A0A0A6YYK4 115 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 TRAV8-4A0A0B4J246 113 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 K7EP34 96 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 CT83Q5H943 113 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 PATE2Q6UY27 113 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 WIPF2Q8TF74 440 aaPredicted RBP5.19□□□□□ -1.58
SMC1A-202ENST00000375340 VCX2Q9H322 139 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 MED13Q9UHV7 2174 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 M0R1W7 72 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 TMEM95Q3KNT9 176 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 LYPD1Q8N2G4 141 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 GTSF1Q8WW33 167 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 PRR14LQ5THK1 2151 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 TNRC6BQ9UPQ9 1833 aaKnown RBP5.19□□□□□ -1.58
SMC1A-202ENST00000375340 IGLV2-23P01705 113 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 BRWD1-AS2P59051 145 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 CIRBPQ14011 172 aaKnown RBP5.19□□□□□ -1.58
SMC1A-202ENST00000375340 SPOCK3Q9BQ16 436 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 SCRT2Q9NQ03 307 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 TMEM14CQ9P0S9 112 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 NPFFR1Q9GZQ6 430 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 KLK9Q9UKQ9 250 aa5.19□□□□□ -1.58
SMC1A-202ENST00000375340 C22orf46C9J442 243 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 H3BRM9 83 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 OVOL1O14753 267 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 Q6ZS92 163 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 GP9P14770 177 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 HOXB4P17483 251 aaPredicted RBP5.18□□□□□ -1.58
SMC1A-202ENST00000375340 GRNP28799 593 aaKnown RBP5.18□□□□□ -1.58
SMC1A-202ENST00000375340 IGKV1OR2-108A0A075B7D4 117 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 TMEM262E9PQX1 116 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 GATA1P15976 413 aaPredicted RBP5.18□□□□□ -1.58
SMC1A-202ENST00000375340 CFHR4Q92496 578 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 NDUFS7O75251 213 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 DPH3P1Q9H4G8 78 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 SMPXQ9UHP9 88 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 IGLC1P0CG04 106 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 PLA2G2CQ5R387 149 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 ZNF562Q6V9R5 426 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 SHISA9B4DS77 424 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 OR13C6PQ8NH95 151 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 CEACAM8P31997 349 aaPredicted RBP5.18□□□□□ -1.58
SMC1A-202ENST00000375340 PAX2Q02962 417 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 C8orf86Q6ZUL3 223 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 CEND1Q8N111 149 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 DYNAPQ8N1N2 210 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 CKS1BP61024 79 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 ARFGEF3Q5TH69 2177 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 C10orf126Q8N4M7 172 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 Q8N8P6 123 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 C11orf44Q8N8P7 122 aa5.18□□□□□ -1.58
SMC1A-202ENST00000375340 COA6Q5JTJ3 125 aaKnown RBP5.17□□□□□ -1.58
SMC1A-202ENST00000375340 RNF5Q99942 180 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 TOMM7Q9P0U1 55 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 MSMPQ1L6U9 139 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 C3orf36Q3SXR2 165 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 MRPL36Q9P0J6 103 aaKnown RBP5.17□□□□□ -1.58
SMC1A-202ENST00000375340 EFNA4P52798 201 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 ZNF503Q96F45 646 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 FAM167A-AS1Q96KT0 104 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 ADAMTS20P59510 1910 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 DTX2Q86UW9 622 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 NACAE9PAV3 2078 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 ZNF688P0C7X2 276 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 TP53TG1Q9Y2A0 90 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 P0C879 139 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 PRR25Q96S07 402 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 BPESC1Q9GZL8 116 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 A0A1W2PPM0 123 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 MYO9AB2RTY4 2548 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 EGR2P11161 476 aaPredicted RBP5.17□□□□□ -1.58
SMC1A-202ENST00000375340 GNLYP22749 145 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 GDF5OSQ5U4N7 250 aa5.17□□□□□ -1.58
SMC1A-202ENST00000375340 PCNTO95613 3336 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms