RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZC2HC1AQ96GY0 325 aa9.22□□□□□ -0.93
PTCH1-203ENST00000375274 C9orf118A6NHY6 69 aa9.21□□□□□ -0.93
PTCH1-203ENST00000375274 STHQ8IWL8 128 aa9.21□□□□□ -0.93
PTCH1-203ENST00000375274 SPOCK3Q9BQ16 436 aa9.21□□□□□ -0.93
PTCH1-203ENST00000375274 CEACAM8P31997 349 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-203ENST00000375274 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.94
PTCH1-203ENST00000375274 USMG5Q96IX5 58 aa9.21□□□□□ -0.94
PTCH1-203ENST00000375274 CSPG4Q6UVK1 2322 aa9.21□□□□□ -0.94
PTCH1-203ENST00000375274 H3BRN7 92 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 EP400Q96L91 3159 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 WDR87Q6ZQQ6 2873 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 PF4P02776 101 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 C2orf66Q6UXQ4 117 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 WIPF2Q8TF74 440 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-203ENST00000375274 A0A087WWL8 130 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 LY6DQ14210 128 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 TDRG1Q3Y452 100 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 Q8N8P6 123 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 NDUFS8O00217 210 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 NPYP01303 97 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 BVES-AS1Q5T3Y7 98 aa9.2□□□□□ -0.94
PTCH1-203ENST00000375274 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-203ENST00000375274 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 K7EM74 188 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 OVOL3O00110 214 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 SSBP2P81877 361 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 FAM110DQ8TAY7 271 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-203ENST00000375274 BPESC1Q9GZL8 116 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 FAM215AQ9Y5M1 114 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 K7EP13 123 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 CKS1BP61024 79 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 IL17RELQ6ZVW7 336 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 LCNL1Q6ZST4 164 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 MUC6Q6W4X9 2439 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 FAM223BA6NKX1 122 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 LTAP01374 205 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
PTCH1-203ENST00000375274 IGLC7A0M8Q6 106 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 ZNF491Q8N8L2 437 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 PLXNB1O43157 2135 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 NPC2P61916 151 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 Q6ZVH6 145 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 ZNF747Q9BV97 191 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
PTCH1-203ENST00000375274 PCNX3Q9H6A9 2034 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 G3V318 75 aa9.18□□□□□ -0.94
PTCH1-203ENST00000375274 KLF5Q13887 457 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-203ENST00000375274 MRPL35Q9NZE8 188 aaKnown RBP9.17□□□□□ -0.94
PTCH1-203ENST00000375274 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
PTCH1-203ENST00000375274 C11orf1Q9H5F2 150 aa9.17□□□□□ -0.94
PTCH1-203ENST00000375274 KAAG1Q9UBP8 84 aa9.17□□□□□ -0.94
PTCH1-203ENST00000375274 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
PTCH1-203ENST00000375274 UBE2E1P51965 193 aa9.17□□□□□ -0.94
PTCH1-203ENST00000375274 PRR30Q53SZ7 412 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C2orf82Q6UX34 121 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 TP53TG1Q9Y2A0 90 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 SPXQ9BT56 116 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 B4DSR2 109 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C9JAW5 83 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 K7EP34 96 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 SLC25A16P16260 332 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C11orf44Q8N8P7 122 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 C2CD3Q4AC94 2353 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 VGLL1Q99990 258 aa9.16□□□□□ -0.94
PTCH1-203ENST00000375274 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
PTCH1-203ENST00000375274 MORN5Q5VZ52 161 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
PTCH1-203ENST00000375274 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 CUL9Q8IWT3 2517 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 F8VRH5 84 aa9.15□□□□□ -0.94
PTCH1-203ENST00000375274 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 NDUFS7O75251 213 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 IGLV2-14P01704 120 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 ZNF415Q09FC8 603 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 PTPN13Q12923 2485 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 MYO18BQ8IUG5 2567 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms