RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 AMBPP02760 352 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 HBBP68871 147 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FAM162BQ5T6X4 162 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 GDF5OSQ5U4N7 250 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 OR10D4PQ8NGN7 298 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 NDFIP1Q9BT67 221 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FLNAP21333 2647 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 APCSP02743 223 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FAM106AQ4KMX7 169 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 Q6AWC8 147 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 C10orf99Q6UWK7 81 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PACRGQ96M98 296 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 GRIFINA4D1Z8 144 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SOCS3O14543 225 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 ESDP10768 282 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 Q8TAT8 98 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PGLYRP4Q96LB8 373 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PPP1R14DQ9NXH3 145 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 TP53TG3Q9ULZ0 132 aa13.72□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SH2D1AO60880 128 aa13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 RPLP1P05386 114 aaKnown RBP13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SRSF2Q01130 221 aaKnown RBP13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SLAQ13239 276 aa13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 OR10J3Q5JRS4 329 aa13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
HLA-DQB1-201ENST00000374943 A8MWP6 167 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 HAX1O00165 279 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 LGALS1P09382 135 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 GZMBP10144 247 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 BMI1P35226 326 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TMEM18Q96B42 140 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 SMPXQ9UHP9 88 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 CCDC168Q8NDH2 2452 aa13.7□□□□□ -0.22
HLA-DQB1-201ENST00000374943 KRTAP1-1Q07627 177 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 ERCC8Q13216 396 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 PYY3Q5JQD4 70 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 C9orf47Q6ZRZ4 202 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 UBE2E2Q96LR5 201 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 CD5LO43866 347 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 LINC00310P59036 64 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 RPS20P60866 119 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TM4SF20Q53R12 229 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 GATD1Q8NB37 220 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
HLA-DQB1-201ENST00000374943 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 A0A1B0GW15 77 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TMEM189A5PLL7 270 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 CAMPP49913 170 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 ZNF80P51504 273 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 ZNF138P52744 262 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 DNLZQ5SXM8 178 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 REC114Q7Z4M0 266 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 AGPAT4-IT1Q9H0P7 198 aa13.68□□□□□ -0.22
HLA-DQB1-201ENST00000374943 A0A1B0GUT8 65 aa13.67□□□□□ -0.22
HLA-DQB1-201ENST00000374943 SRIP30626 198 aa13.67□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TMEM78Q5T7P6 136 aa13.67□□□□□ -0.22
HLA-DQB1-201ENST00000374943 NUPR1O60356 82 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 C20orf173Q96LM9 149 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 LENEPQ9Y5L5 61 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 F8P00451 2351 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 FABP5P3A8MUU1 101 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 SERF1AO75920 110 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 RIGQ13278 110 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 KLF5Q13887 457 aaPredicted RBP13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 NIT2Q9NQR4 276 aa13.66□□□□□ -0.22
HLA-DQB1-201ENST00000374943 LGALS9O00182 355 aa13.65□□□□□ -0.22
HLA-DQB1-201ENST00000374943 OVOL1O14753 267 aa13.65□□□□□ -0.22
HLA-DQB1-201ENST00000374943 ZNF738Q8NE65 137 aa13.65□□□□□ -0.22
HLA-DQB1-201ENST00000374943 SSBP4Q9BWG4 385 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-201ENST00000374943 OTOGQ6ZRI0 2925 aa13.65□□□□□ -0.22
HLA-DQB1-201ENST00000374943 TMEM213A2RRL7 107 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 F2Z2F3 143 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ARMS2P0C7Q2 107 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 PAFAH1B2P68402 229 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 LINC01559Q495D7 138 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 DUX5Q96PT3 197 aa13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 ALKBH7Q9BT30 221 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQB1-201ENST00000374943 AKAP9Q99996 3911 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 HIST1H1AQ02539 215 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 JOSD1Q15040 202 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 C18orf32Q8TCD1 76 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 BORCS7Q96B45 105 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 A0A087WW49 117 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 CTRLP40313 264 aa13.63□□□□□ -0.23
HLA-DQB1-201ENST00000374943 LINC00477Q96M19 166 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms