RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CD33P20138 364 aa13.17□□□□□ -0.3
C9orf43-202ENST00000374165 FLI1Q01543 452 aaPredicted RBP13.17□□□□□ -0.3
C9orf43-202ENST00000374165 NOTCH1P46531 2555 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 TRAV8-2A0A0B4J237 113 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 M0R3E3 92 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 SOCS3O14543 225 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 BMI1P35226 326 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 FAM3BP58499 235 aaPredicted RBP13.16□□□□□ -0.3
C9orf43-202ENST00000374165 RAB5BP61020 215 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
C9orf43-202ENST00000374165 AGRNO00468 2067 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 NBEAL1Q6ZS30 2694 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 IGLL1P15814 213 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
C9orf43-202ENST00000374165 V9GYV3 84 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
C9orf43-202ENST00000374165 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
C9orf43-202ENST00000374165 LTAP01374 205 aa13.14□□□□□ -0.31
C9orf43-202ENST00000374165 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
C9orf43-202ENST00000374165 S100A9P06702 114 aaKnown RBP13.14□□□□□ -0.31
C9orf43-202ENST00000374165 IBA57Q5T440 356 aaKnown RBP13.14□□□□□ -0.31
C9orf43-202ENST00000374165 MLST8Q9BVC4 326 aa13.14□□□□□ -0.31
C9orf43-202ENST00000374165 OSTCQ9NRP0 149 aa13.14□□□□□ -0.31
C9orf43-202ENST00000374165 PSG9Q00887 426 aa13.13□□□□□ -0.31
C9orf43-202ENST00000374165 SMIM12Q96EX1 92 aa13.13□□□□□ -0.31
C9orf43-202ENST00000374165 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
C9orf43-202ENST00000374165 DEFB1P60022 68 aa13.13□□□□□ -0.31
C9orf43-202ENST00000374165 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
C9orf43-202ENST00000374165 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
C9orf43-202ENST00000374165 ZNF705FA8MVS1 300 aaPredicted RBP13.12□□□□□ -0.31
C9orf43-202ENST00000374165 DIRC3C9JPN6 131 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 K7EQG2 157 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 ZNF253O75346 499 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 TRGC2P03986 189 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 Q86TA4 180 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 PRR27Q6MZM9 219 aa13.12□□□□□ -0.31
C9orf43-202ENST00000374165 TMEM75Q8N9X5 138 aa13.11□□□□□ -0.31
C9orf43-202ENST00000374165 SRD5A3Q9H8P0 318 aa13.11□□□□□ -0.31
C9orf43-202ENST00000374165 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 K7EQM0 130 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 TYMSP04818 313 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 PSG3Q16557 428 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 SLC50A1Q9BRV3 221 aa13.1□□□□□ -0.31
C9orf43-202ENST00000374165 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
C9orf43-202ENST00000374165 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
C9orf43-202ENST00000374165 MEOX2P50222 304 aa13.09□□□□□ -0.31
C9orf43-202ENST00000374165 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
C9orf43-202ENST00000374165 NUDT10Q8NFP7 164 aa13.09□□□□□ -0.31
C9orf43-202ENST00000374165 NUDT11Q96G61 164 aa13.09□□□□□ -0.31
C9orf43-202ENST00000374165 SPAG8Q99932 426 aaPredicted RBP13.09□□□□□ -0.31
C9orf43-202ENST00000374165 TRAV25A0A0B4J276 109 aa13.08□□□□□ -0.31
C9orf43-202ENST00000374165 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.31
C9orf43-202ENST00000374165 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.31
C9orf43-202ENST00000374165 CSN1S1P47710 185 aa13.08□□□□□ -0.31
C9orf43-202ENST00000374165 INSL3P51460 131 aa13.08□□□□□ -0.31
C9orf43-202ENST00000374165 PAFAH1B2P68402 229 aa13.08□□□□□ -0.31
C9orf43-202ENST00000374165 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.31
C9orf43-202ENST00000374165 PHOX2AO14813 284 aa13.08□□□□□ -0.32
C9orf43-202ENST00000374165 ZNF124Q15973 351 aa13.08□□□□□ -0.32
C9orf43-202ENST00000374165 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
C9orf43-202ENST00000374165 ASCL2Q99929 193 aa13.08□□□□□ -0.32
C9orf43-202ENST00000374165 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
C9orf43-202ENST00000374165 F6UB75 175 aa13.07□□□□□ -0.32
C9orf43-202ENST00000374165 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
C9orf43-202ENST00000374165 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
C9orf43-202ENST00000374165 KRTAP21-3Q3LHN1 58 aa13.07□□□□□ -0.32
C9orf43-202ENST00000374165 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
C9orf43-202ENST00000374165 MCRIP2Q9BUT9 160 aaKnown RBP13.07□□□□□ -0.32
C9orf43-202ENST00000374165 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
C9orf43-202ENST00000374165 SERTM2A0A1B0GWG4 89 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BKO60814 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BJP06899 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BOP23527 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BBP33778 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BDP58876 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BCP62807 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST2H2BEQ16778 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.06□□□□□ -0.32
C9orf43-202ENST00000374165 FRZBQ92765 325 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BHQ93079 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BNQ99877 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 HIST1H2BMQ99879 126 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 BIN3Q9NQY0 253 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 TRAV9-1A0A075B6T8 112 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 WIPF1O43516 503 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 GATCO43716 136 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms