RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 SPINK8P0C7L1 97 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 COL8A2P25067 703 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 C17orf58Q2M2W7 97 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 ZNF826PQ6ZT77 177 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 TMEM133Q9H2Q1 129 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 FREM1Q5H8C1 2179 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 FCER1GP30273 86 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 ALKBH6Q3KRA9 238 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 MBNL2Q5VZF2 373 aaKnown RBP11.32□□□□□ -0.6
A1CF-202ENST00000373993 C22orf34Q6ZV56 151 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 SRSF12Q8WXF0 261 aaKnown RBP11.32□□□□□ -0.6
A1CF-202ENST00000373993 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 DCTN5Q9BTE1 182 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 CDIP1Q9H305 208 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
A1CF-202ENST00000373993 PRR14LQ5THK1 2151 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
A1CF-202ENST00000373993 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 APOMO95445 188 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 IGKCP01834 107 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 IGHG4P01861 327 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
A1CF-202ENST00000373993 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 ODF1Q14990 250 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 TWIST1Q15672 202 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 MLANAQ16655 118 aa11.31□□□□□ -0.6
A1CF-202ENST00000373993 C1orf229Q6ZS94 237 aaPredicted RBP11.31□□□□□ -0.6
A1CF-202ENST00000373993 NHP2Q9NX24 153 aaKnown RBP11.31□□□□□ -0.6
A1CF-202ENST00000373993 IGKV1D-17A0A075B6S4 117 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
A1CF-202ENST00000373993 TMEM116Q8NCL8 245 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 D6R8Y8 96 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 M0QXV9 152 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 DPM2O94777 84 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 FOXC2Q99958 501 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 ROS1P08922 2347 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 MTORP42345 2549 aa11.3□□□□□ -0.6
A1CF-202ENST00000373993 ACANP16112 2415 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 ZNF833PQ6ZTB9 187 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 Q6ZUT4 128 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 SH2D6Q7Z4S9 175 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 FAM110AQ9BQ89 295 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
A1CF-202ENST00000373993 DEFB113Q30KQ7 82 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 CFAP126Q5VTH2 177 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 MYOD1P15172 320 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 CXorf67Q86X51 503 aaPredicted RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 DLX4Q92988 240 aaPredicted RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
A1CF-202ENST00000373993 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
A1CF-202ENST00000373993 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.6
A1CF-202ENST00000373993 IGKV3-15P01624 115 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.61
A1CF-202ENST00000373993 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
A1CF-202ENST00000373993 DSCAMO60469 2012 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
A1CF-202ENST00000373993 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 DKK2Q9UBU2 259 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
A1CF-202ENST00000373993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
A1CF-202ENST00000373993 LHBP01229 141 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 PLGLAQ15195 96 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 SBSPONQ8IVN8 264 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 FAM169BQ8N8A8 192 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 C8orf31Q8N9H6 132 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 CCL19Q99731 98 aa11.26□□□□□ -0.61
A1CF-202ENST00000373993 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 ATP5G2Q06055 141 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 ZFAND6Q6FIF0 208 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 Q6Q795 121 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 C20orf78Q9BR46 151 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 LYZL6O75951 148 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 PLAUP00749 431 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 ORM2P19652 201 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 CKS2P33552 79 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
A1CF-202ENST00000373993 IGKV2D-26A0A0A0MRZ7 120 aa11.24□□□□□ -0.61
A1CF-202ENST00000373993 K7ERJ3 54 aa11.24□□□□□ -0.61
A1CF-202ENST00000373993 HOXA3O43365 443 aaPredicted RBP11.24□□□□□ -0.61
A1CF-202ENST00000373993 SRD5A1P18405 259 aa11.24□□□□□ -0.61
A1CF-202ENST00000373993 PLNP26678 52 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms