RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 H3BMG7 143 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 CRYBA4P53673 196 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 FANCMQ8IYD8 2048 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 RHODO00212 210 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 IL17RELQ6ZVW7 336 aa11.39□□□□□ -0.59
LMX1B-202ENST00000373474 H3BUX3 64 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 CRLF1O75462 422 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 TMEM213A2RRL7 107 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 I3L3M4 83 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 NDUFB8O95169 186 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 FAM110DQ8TAY7 271 aaPredicted RBP11.38□□□□□ -0.59
LMX1B-202ENST00000373474 BRD3OSQ6XYD6 125 aa11.38□□□□□ -0.59
LMX1B-202ENST00000373474 IGLC7A0M8Q6 106 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 NPYP01303 97 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 CFHR2P36980 270 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 C12orf74Q32Q52 190 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 SMIM20Q8N5G0 67 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 LINC00311Q8N616 119 aa11.37□□□□□ -0.59
LMX1B-202ENST00000373474 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
LMX1B-202ENST00000373474 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 B4DSR2 109 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
LMX1B-202ENST00000373474 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 A0A087WWL8 130 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 SAA4P35542 130 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 NUP210Q8TEM1 1887 aaPredicted RBP11.36□□□□□ -0.59
LMX1B-202ENST00000373474 F8VRH5 84 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 H3BRN7 92 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 C11orf52Q96A22 123 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
LMX1B-202ENST00000373474 ATOX1O00244 68 aa11.35□□□□□ -0.59
LMX1B-202ENST00000373474 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
LMX1B-202ENST00000373474 MRPL51Q4U2R6 128 aaKnown RBP11.35□□□□□ -0.59
LMX1B-202ENST00000373474 LINC01545Q5VT33 79 aa11.35□□□□□ -0.59
LMX1B-202ENST00000373474 PLXNB3Q9ULL4 1909 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 ZNF134P52741 427 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 DAZ1Q9NQZ3 744 aaKnown RBP11.34□□□□□ -0.59
LMX1B-202ENST00000373474 NBL1P41271 181 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
LMX1B-202ENST00000373474 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
LMX1B-202ENST00000373474 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.59
LMX1B-202ENST00000373474 Q8NFD4 153 aa11.33□□□□□ -0.59
LMX1B-202ENST00000373474 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 LY6HO94772 140 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 UBE2E1P51965 193 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 SCRT2Q9NQ03 307 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 SHISA9B4DS77 424 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 GNLYP22749 145 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
LMX1B-202ENST00000373474 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 NSUN5P1Q3KNT7 163 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
LMX1B-202ENST00000373474 K7ERJ3 54 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 IGHV3-53P01767 116 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 WT1-ASQ06250 92 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 SLX1AQ9BQ83 275 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 MRPL35Q9NZE8 188 aaKnown RBP11.32□□□□□ -0.6
LMX1B-202ENST00000373474 LRRK1Q38SD2 2015 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 J3QQQ9 107 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 CFC1P0CG37 223 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 IGFL3Q6UXB1 125 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 NKAPP1Q8N9T2 125 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 TRAV12-1A0A0B4J245 112 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
LMX1B-202ENST00000373474 SRSF2Q01130 221 aaKnown RBP11.32□□□□□ -0.6
LMX1B-202ENST00000373474 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
LMX1B-202ENST00000373474 K7EN84 100 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 SAP30O75446 220 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 KRTAP27-1Q3LI81 207 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
LMX1B-202ENST00000373474 CEACAM8P31997 349 aaPredicted RBP11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PRR20EP86478 221 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PRR20CP86479 221 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PRR20DP86480 221 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PRR20BP86481 221 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 PRR20AP86496 221 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
LMX1B-202ENST00000373474 RP1P56715 2156 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 IGHG2P01859 326 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms