RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 H1FXQ92522 213 aaKnown RBP6.51□□□□□ -1.37
GARNL3-201ENST00000373386 TNFRSF19Q9NS68 423 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 TEX50A0A1B0GTY4 177 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 NDUFC2O95298 119 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 AMY1AP04745 511 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 LGALS1P09382 135 aaKnown RBP6.51□□□□□ -1.37
GARNL3-201ENST00000373386 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 MSMPQ1L6U9 139 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 PQLC2Q6ZP29 291 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 SLC25A48Q6ZT89 311 aaKnown RBP6.51□□□□□ -1.37
GARNL3-201ENST00000373386 ZMAT4Q9H898 229 aa6.51□□□□□ -1.37
GARNL3-201ENST00000373386 C2orf83Q53S99 150 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 SAP30LQ9HAJ7 183 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 FAM215AQ9Y5M1 114 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 CNOT1A5YKK6 2376 aaKnown RBP6.5□□□□□ -1.37
GARNL3-201ENST00000373386 KNTC1P50748 2209 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 TRACP01848 142 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 ATP5G1P05496 136 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 SAA2P0DJI9 122 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-201ENST00000373386 CRYGAP11844 174 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 ZC2HC1BQ5TFG8 222 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF833PQ6ZTB9 187 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 TMEM190Q8WZ59 177 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 RND1Q92730 232 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 DLX4Q92988 240 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-201ENST00000373386 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 GAFA1Q96PS6 74 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 NABP2Q9BQ15 211 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 RPUSD1Q9UJJ7 312 aaKnown RBP6.5□□□□□ -1.37
GARNL3-201ENST00000373386 DSCAML1Q8TD84 2053 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 CEP250Q9BV73 2442 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 LY6LH3BQJ8 138 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 UPK2O00526 184 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 CD69Q07108 199 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 KLF5Q13887 457 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-201ENST00000373386 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 PLEKHA3Q9HB20 300 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 TANC2Q9HCD6 1990 aa6.5□□□□□ -1.37
GARNL3-201ENST00000373386 FAM186AA6NE01 2351 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 WT1P19544 449 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 FOXA3P55318 350 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF672Q499Z4 452 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 LINC00311Q8N616 119 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 F11RQ9Y624 299 aaKnown RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 SHISA9B4DS77 424 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 M0R1B8 84 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 LEPROTL1O95214 131 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 IGHV1-46P01743 117 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 OR5AL1P0C617 328 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 KLF17Q5JT82 389 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 ZNRF1Q8ND25 227 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 FAM57AQ8TBR7 257 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 ITLN1Q8WWA0 313 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
GARNL3-201ENST00000373386 FRYQ5TBA9 3013 aa6.49□□□□□ -1.37
GARNL3-201ENST00000373386 IZUMO1RA6ND01 250 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 MOB3BQ86TA1 216 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 C15orf53Q8NAA6 179 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 IGF2BP2-AS1Q96M15 143 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 AKAP13Q12802 2813 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 PTPRZ1P23471 2315 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-201ENST00000373386 TRAV8-2A0A0B4J237 113 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 K7ERJ3 54 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 CHEK1O14757 476 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 SPINK4O60575 86 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 APOHP02749 345 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-201ENST00000373386 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 FXYD3Q14802 87 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 DEFB109BQ30KR1 87 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-201ENST00000373386 CEND1Q8N111 149 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 DEFB124Q8NES8 71 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 VKORC1Q9BQB6 163 aa6.48□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF331Q9NQX6 463 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-201ENST00000373386 NHP2Q9NX24 153 aaKnown RBP6.48□□□□□ -1.37
GARNL3-201ENST00000373386 TRAV13-1A0A0B4J241 112 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 H7C1H1 209 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 MGST1P10620 155 aaKnown RBP6.47□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF137PP52743 207 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 LINC01545Q5VT33 79 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 BCL6BQ8N143 479 aaPredicted RBP6.47□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 CACNA1DQ01668 2161 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 FSTL3O95633 263 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 NCR2O95944 276 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 IGLV2-8P01709 118 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 CD7P09564 240 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 CD40P25942 277 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 FXYD2P54710 66 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 PVRIGQ6DKI7 326 aa6.47□□□□□ -1.37
GARNL3-201ENST00000373386 CIARTQ8N365 385 aaPredicted RBP6.47□□□□□ -1.37
GARNL3-201ENST00000373386 ZNF714Q96N38 554 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms