RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TMEM160Q9NX00 188 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-201ENST00000373019 EDDM3AQ14507 147 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 CD177Q8N6Q3 437 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 FOXC2Q99958 501 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 RAB9BQ9NP90 201 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 IGKV3D-15A0A087WSY6 115 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 LINC01619G3V211 115 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 TCL1BO95988 128 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 ORM2P19652 201 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 LEPP41159 167 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 ATP5IP56385 69 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-201ENST00000373019 TTC32Q5I0X7 151 aa7.53□□□□□ -1.2
SF3A3-201ENST00000373019 ZNF71Q9NQZ8 489 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-201ENST00000373019 INTS1Q8N201 2190 aaKnown RBP7.52□□□□□ -1.21
SF3A3-201ENST00000373019 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 ATP1A1-AS1Q5TC04 95 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 GOLT1AQ6ZVE7 132 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
SF3A3-201ENST00000373019 CSDC2Q9Y534 153 aaKnown RBP7.52□□□□□ -1.21
SF3A3-201ENST00000373019 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 SSR4P51571 173 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 Q6Q795 121 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 ZNF462Q96JM2 2506 aa7.52□□□□□ -1.21
SF3A3-201ENST00000373019 FCN3O75636 299 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 UBE2D1P51668 147 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 EXOC3-AS1Q8N2X6 119 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 THAP8Q8NA92 274 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 NRGNQ92686 78 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 MDFICQ9P1T7 246 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 SNCGO76070 127 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 CKS2P33552 79 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 UCNP55089 124 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 SPRNQ5BIV9 151 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 TWIST1Q15672 202 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 PRR30Q53SZ7 412 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-201ENST00000373019 TRGV9Q99603 122 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 RASL11BQ9BPW5 248 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 SPXQ9BT56 116 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 NDUFA4L2Q9NRX3 87 aa7.51□□□□□ -1.21
SF3A3-201ENST00000373019 ZCCHC24Q8N2G6 241 aaKnown RBP7.5□□□□□ -1.21
SF3A3-201ENST00000373019 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
SF3A3-201ENST00000373019 C3orf56Q8N813 242 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 USP24Q9UPU5 2620 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 A8MWV9 139 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 FOLR3P41439 243 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 IMMP1LQ96LU5 166 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 IGHV1-45A0A0A0MS14 117 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 TRBV6-1A0A0K0K1D8 114 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 TNFRSF1AP19438 455 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 ASIPP42127 132 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 MRPL14Q6P1L8 145 aaKnown RBP7.5□□□□□ -1.21
SF3A3-201ENST00000373019 LINC01587Q99440 93 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 CALYQ9NYX4 217 aa7.5□□□□□ -1.21
SF3A3-201ENST00000373019 SPENQ96T58 3664 aaKnown RBP7.5□□□□□ -1.21
SF3A3-201ENST00000373019 CGB1A6NKQ9 187 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 WT1-ASQ06250 92 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 MDP1Q86V88 176 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 ODF3Q96PU9 254 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 LOC400499M0QZD8 3231 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 CD7P09564 240 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 SAA1P0DJI8 122 aaPredicted RBP7.49□□□□□ -1.21
SF3A3-201ENST00000373019 ZNF575Q86XF7 245 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 SMG1Q96Q15 3661 aaKnown RBP7.49□□□□□ -1.21
SF3A3-201ENST00000373019 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 PROCRQ9UNN8 238 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 SPG11Q96JI7 2443 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 IQCF6A8MYZ5 107 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 ATP5LO75964 103 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 C5orf47Q569G3 176 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 CTSZQ9UBR2 303 aa7.49□□□□□ -1.21
SF3A3-201ENST00000373019 COL12A1Q99715 3063 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 LRRK2Q5S007 2527 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 H3BVH4 76 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 LGALS1P09382 135 aaKnown RBP7.48□□□□□ -1.21
SF3A3-201ENST00000373019 TBC1D28Q2M2D7 210 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 DSCAML1Q8TD84 2053 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 CGB3P0DN86 165 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 CGB7P0DN87 165 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 COX6A1P12074 109 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 OBP2BQ9NPH6 170 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 TRAV8-2A0A0B4J237 113 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 PINLYPA6NC86 204 aa7.48□□□□□ -1.21
SF3A3-201ENST00000373019 CRIP2P52943 208 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-201ENST00000373019 DNAJC13O75165 2243 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 IGKV1D-17A0A075B6S4 117 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 NCBP2LA6PVI3 153 aaKnown RBP7.47□□□□□ -1.21
SF3A3-201ENST00000373019 NDUFA3O95167 84 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 TGFAP01135 160 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 PRDX2P32119 198 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 CCL11P51671 97 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms