RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 CLUHP3Q96NS8 147 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 XCL2Q9UBD3 114 aa11.95□□□□□ -0.5
TMEM53-203ENST00000372242 DIRC3C9JPN6 131 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 NPIPB6E9PJ23 425 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 M0R2Z0 102 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 CST9LP1Q5W188 147 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
TMEM53-203ENST00000372242 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
TMEM53-203ENST00000372242 CT45A10P0DMU9 189 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 GOLT1AQ6ZVE7 132 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 C5orf17Q8NAS9 161 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 TGP01266 2768 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 UBE2CO00762 179 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 HBE1P02100 147 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 ATP5G3P48201 142 aa11.93□□□□□ -0.5
TMEM53-203ENST00000372242 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 C9orf47Q6ZRZ4 202 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 Q6ZWC4 215 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 Q8TAT8 98 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 EPDR1Q9UM22 224 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
TMEM53-203ENST00000372242 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 TRAV8-1A0A0A6YYK1 113 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 TCRAP04437 139 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 KIR3DS1Q14943 382 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
TMEM53-203ENST00000372242 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 J3KRW8 73 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 SPATA25Q9BR10 227 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 OVOL2Q9BRP0 275 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
TMEM53-203ENST00000372242 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 APOC3P02656 99 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 PPT1P50897 306 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
TMEM53-203ENST00000372242 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 ARL6IP6Q8N6S5 226 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 CSNK1G2-AS1Q8NCQ2 148 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 RCHY1Q96PM5 261 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 ZMAT4Q9H898 229 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
TMEM53-203ENST00000372242 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
TMEM53-203ENST00000372242 SPRY2O43597 315 aa11.89□□□□□ -0.51
TMEM53-203ENST00000372242 NHLRC4P0CG21 123 aaPredicted RBP11.89□□□□□ -0.51
TMEM53-203ENST00000372242 RNF183Q96D59 192 aa11.89□□□□□ -0.51
TMEM53-203ENST00000372242 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
TMEM53-203ENST00000372242 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
TMEM53-203ENST00000372242 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 CDKN1BP46527 198 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 ZNF138P52744 262 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 ATG101Q9BSB4 218 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 CARHSP1Q9Y2V2 147 aaKnown RBP11.88□□□□□ -0.51
TMEM53-203ENST00000372242 DNAH9Q9NYC9 4486 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 PEX7O00628 323 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 CYB561D1Q8N8Q1 229 aa11.88□□□□□ -0.51
TMEM53-203ENST00000372242 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
TMEM53-203ENST00000372242 LINC00518Q8N0U6 118 aa11.87□□□□□ -0.51
TMEM53-203ENST00000372242 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
TMEM53-203ENST00000372242 ODF3Q96PU9 254 aa11.87□□□□□ -0.51
TMEM53-203ENST00000372242 K7EQM0 130 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 IGLV2-11P01706 119 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 TSPOP30536 169 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 LEPP41159 167 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 CTAG1AP78358 180 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 C1orf158Q8N1D5 194 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 OR11H2Q8NH07 326 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 TP53TG1Q9Y2A0 90 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 SCO2A0A1W2PP80 73 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 IFNA1P01562 189 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 AMBPP02760 352 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 RBMY1A1P0DJD3 496 aaKnown RBP11.86□□□□□ -0.51
TMEM53-203ENST00000372242 RBMY1CP0DJD4 496 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 BCL2P10415 239 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 RBMY1FQ15415 496 aaKnown RBP11.86□□□□□ -0.51
TMEM53-203ENST00000372242 GFI1BQ5VTD9 330 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 SVBPQ8N300 66 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 ZFAND2AQ8N6M9 145 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 RARRES2Q99969 163 aa11.86□□□□□ -0.51
TMEM53-203ENST00000372242 INSP01308 110 aa11.85□□□□□ -0.51
TMEM53-203ENST00000372242 PRR9Q5T870 116 aa11.85□□□□□ -0.51
TMEM53-203ENST00000372242 PSG8Q9UQ74 426 aa11.85□□□□□ -0.51
TMEM53-203ENST00000372242 F6UZH7 168 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms