RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
ATG4A-203ENST00000372232 SPINK9Q5DT21 86 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 H2BFWTQ7Z2G1 175 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 PRSS22Q9GZN4 317 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 MGAQ8IWI9 3026 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 HCFC1P51610 2035 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 LINC01548A6NM66 108 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 A8MWV9 139 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 LINC01619G3V211 115 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 UCNP55089 124 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 CIARTQ8N365 385 aaPredicted RBP6.98□□□□□ -1.29
ATG4A-203ENST00000372232 GATD1Q8NB37 220 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 PGLYRP4Q96LB8 373 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 FAM215AQ9Y5M1 114 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 PTPRBP23467 1997 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 INTS1Q8N201 2190 aaKnown RBP6.98□□□□□ -1.29
ATG4A-203ENST00000372232 NPFFO15130 113 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 TFF1P04155 84 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 Q6ZQT7 251 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 ANKRD29Q8N6D5 301 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 OR1L4Q8NGR5 311 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 KIR2DL5BQ8NHK3 375 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 IFI27L1Q96BM0 104 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 NBEAQ8NFP9 2946 aa6.98□□□□□ -1.29
ATG4A-203ENST00000372232 SVILO95425 2214 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 AKAP13Q12802 2813 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 TRIAP1O43715 76 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 IL4P05112 153 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 GATA4P43694 442 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 EIF4EBP1Q13541 118 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-203ENST00000372232 KLF17Q5JT82 389 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-203ENST00000372232 FAM53AQ6NSI3 398 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-203ENST00000372232 OR13A1Q8NGR1 328 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 PRADC1Q9BSG0 188 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 IFI27L2Q9H2X8 130 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 NCOR2Q9Y618 2525 aa6.97□□□□□ -1.29
ATG4A-203ENST00000372232 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.29
ATG4A-203ENST00000372232 DUSP14O95147 198 aaKnown RBP6.96□□□□□ -1.29
ATG4A-203ENST00000372232 PSMB2P49721 201 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 UBE2D3P61077 147 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 UBE2D2P62837 147 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 LOXL1Q08397 574 aaPredicted RBP6.96□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.29
ATG4A-203ENST00000372232 LYRM7Q5U5X0 104 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 SGK494Q96LW2 274 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 SPANXCQ9NY87 97 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF492Q9P255 531 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 DKK2Q9UBU2 259 aa6.96□□□□□ -1.29
ATG4A-203ENST00000372232 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.29
ATG4A-203ENST00000372232 WI2-2373I1.2A0A1W2PRP0 233 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 K7EM74 188 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 PEX7O00628 323 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 NDUFA7O95182 113 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 HBDP02042 147 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 ORM2P19652 201 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 PAX8Q06710 450 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 CD177Q8N6Q3 437 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 C3orf56Q8N813 242 aa6.96□□□□□ -1.3
ATG4A-203ENST00000372232 CEP295Q9C0D2 2601 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 SRRM5B3KS81 715 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 M0R1B8 84 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 PRDX2P32119 198 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 BRWD1-AS2P59051 145 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 TNFAIP6P98066 277 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-203ENST00000372232 MRPL23Q16540 153 aaKnown RBP6.95□□□□□ -1.3
ATG4A-203ENST00000372232 ZNRF2Q8NHG8 242 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 NABP2Q9BQ15 211 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 M0R2P5 195 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 IGHV3-13P01766 116 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 IFI27P40305 119 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-203ENST00000372232 RFESDQ8TAC1 157 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 ODF3Q96PU9 254 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 HIST1H4GQ99525 98 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
ATG4A-203ENST00000372232 CACNA1DQ01668 2161 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 TRAV8-2A0A0B4J237 113 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 OVOL3O00110 214 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 CRYGBP07316 175 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 ZNF329Q86UD4 541 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 TMEM219Q86XT9 240 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 DCTN5Q9BTE1 182 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 MLST8Q9BVC4 326 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 SLC25A2Q9BXI2 301 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 MAP1BP46821 2468 aaKnown RBP6.94□□□□□ -1.3
ATG4A-203ENST00000372232 RP1L1Q8IWN7 2480 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-203ENST00000372232 IGHV3-43A0A0B4J1X8 118 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 SPINT2O43291 252 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 P01737 135 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms